tanlab4generegulation.org

Tan Laboratory

Software & Database. Welcome to the Tan laboratory at the Children's Hospital of Philadelphia. And the University of Pennsylvania Perelman School of Medicine. IM-PET algorithm for predicting enhancer-promoter interactions. He et al. PNAS. 2014. Dynamic gene modules during the progression of breast cancer. Ma et al. Bioinformatics. 2014. 4DGenome database for chromatin interactions. Teng et al. Bioinformatics. 2015. FCOP algorithm for identifying combinatorial transcription factor binding using ChIP-Seq d...

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Software & Database. Welcome to the Tan laboratory at the Children's Hospital of Philadelphia. And the University of Pennsylvania Perelman School of Medicine. IM-PET algorithm for predicting enhancer-promoter interactions. He et al. PNAS. 2014. Dynamic gene modules during the progression of breast cancer. Ma et al. Bioinformatics. 2014. 4DGenome database for chromatin interactions. Teng et al. Bioinformatics. 2015. FCOP algorithm for identifying combinatorial transcription factor binding using ChIP-Seq d...

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Tan Laboratory | tanlab4generegulation.org Reviews

https://tanlab4generegulation.org

Software & Database. Welcome to the Tan laboratory at the Children's Hospital of Philadelphia. And the University of Pennsylvania Perelman School of Medicine. IM-PET algorithm for predicting enhancer-promoter interactions. He et al. PNAS. 2014. Dynamic gene modules during the progression of breast cancer. Ma et al. Bioinformatics. 2014. 4DGenome database for chromatin interactions. Teng et al. Bioinformatics. 2015. FCOP algorithm for identifying combinatorial transcription factor binding using ChIP-Seq d...

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People – Tan Laboratory

http://tanlab4generegulation.org/people

Software & Database. Washington University in Saint Louis. Middle East Technical University. Graduate student at U. of Iowa. PhD student at U. of Pennsylvania. Data scientist at Morelity. Professor at Sichuan U. Postdoc. at U. of Michigan. Assoc professor at Xi’dian U. Bioinformatics scientist at Illumina. Undergrad. at Lafayette College. Research assistant at U. of Iowa. MSTP student at U. of Iowa. Staff scientist at Samsung Genome Institute. Medical student at Loyola U. Undergrad. at U. of Iowa.

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Software & Database – Tan Laboratory

http://tanlab4generegulation.org/software

Software & Database. Software & Database. Discover functional DNA elements based on their epigenetic profiles. Infer gene modules from molecular interaction networks. Identify combinatorial chromatin modification patterns across genomic loci. Identify deregulated molecular pathways by integrating expression, DNA methylation, and protein-protein interaction data. Identify combinatorial chromatin modification patterns by semi-supervised biclustering. A comprehensive database of chromatin interactions.

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Publications – Tan Laboratory

http://tanlab4generegulation.org/publications

Software & Database. 1] Tan K and Ideker. T 2007. Protein interaction networks. in Biological networks. World Scientific, New Jersey. T, Tan K, and Uetz. P 2005. Visualization and integration of protein interaction networks. in Protein-Protein Interactions: A molecular cloning manual. Cold Spring Harbor Laboratory Press. Papers in press and published. 36] Gao T, He B, Liu S, Zhu H, Tan K, Qian J. EnhancerAtlas: a resource for enhancer annotation and analysis in 105 human cell/tissue types. 2016. 32] Chao...

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Search the IBI Website. Join the IBI mailing list. If you are a human and are seeing this field, please leave it blank. Ron Anafi, M.D., Ph.D. Yoseph Barash, Ph.D. Dr Barash is an Assistant Professor of Genetics. His research interests include bioinformatics, computational biology, computer science, genomics, and machine learning. Click here. Ian Bennett, M.D. Shelley Berger, Ph.D. Joel Betesh, M.D. Dr Betesh is an Associate Professor of Internal Medicine and Chief Medical Informatics Officer (CMIO) at t...

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Software & Database. Welcome to the Tan laboratory at the Children's Hospital of Philadelphia. And the University of Pennsylvania Perelman School of Medicine. IM-PET algorithm for predicting enhancer-promoter interactions. He et al. PNAS. 2014. Dynamic gene modules during the progression of breast cancer. Ma et al. Bioinformatics. 2014. 4DGenome database for chromatin interactions. Teng et al. Bioinformatics. 2015. FCOP algorithm for identifying combinatorial transcription factor binding using ChIP-Seq d...

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