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Tara Furstenau

This post will cover how to set up an R notebook. I discussed the benefits of using notebooks in a previous post. More information can be found here. Requirements Jupyter and a current R installation Installation To install from source for Linux (Ubuntu/Debian) you need zmq development headers. sudo apt-get. October 5, 2015. October 4, 2015. Page 1 of 3. View All Posts by Category. Theme and hosted with.

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This post will cover how to set up an R notebook. I discussed the benefits of using notebooks in a previous post. More information can be found here. Requirements Jupyter and a current R installation Installation To install from source for Linux (Ubuntu/Debian) you need zmq development headers. sudo apt-get. October 5, 2015. October 4, 2015. Page 1 of 3. View All Posts by Category. Theme and hosted with.
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Tara Furstenau | tfursten.github.io Reviews

https://tfursten.github.io

This post will cover how to set up an R notebook. I discussed the benefits of using notebooks in a previous post. More information can be found here. Requirements Jupyter and a current R installation Installation To install from source for Linux (Ubuntu/Debian) you need zmq development headers. sudo apt-get. October 5, 2015. October 4, 2015. Page 1 of 3. View All Posts by Category. Theme and hosted with.

INTERNAL PAGES

tfursten.github.io tfursten.github.io
1

About

http://tfursten.github.io/about

Dr Furstenau (Ph.D. Molecular and Cellular Biology, Arizona State University) is a postdoctoral scholar in the Fofanov Lab. In the School of Informatics, Computing, and Cyber Systems. Dr Furstenau was formerly a Ph.D. student in the Cartwright. Theme and hosted with.

2

Posts

http://tfursten.github.io/posts

Portable Dotfiles Using Git and Github. Dispersal Kernels and Isolation-by-Distance. Theme and hosted with.

3

IRkernel

http://tfursten.github.io/programming/2015/10/05/IRkernel.html

October 5, 2015. This post will cover how to set up an R notebook. I discussed the benefits of using notebooks in a previous post. More information can be found here. Jupyter and a current R installation. To install from source for Linux (Ubuntu/Debian) you need zmq development headers. Sudo apt-get install libzmq3-dev. Then start R in the same terminal and install the following packages:. Http:/ irkernel.github.io/'. Open a Jupyter notebook from the command line. Dropdown and select a new R Notebook.

4

Tara Furstenau

http://tfursten.github.io/page2

Dispersal Kernels and Isolation-by-Distance. The effect of the dispersal kernel on isolation-by-distance in a continuous population Tara N. Furstenau and Reed A. Cartwright Abstract Under models of isolation-by-distance, population structure is determined by the probability of identity-by-descent between pairs of genes according to the geographic distance between them. Well established analytical results indicate that. September 1, 2015. April 26, 2015. Page 2 of 3. View All Posts by Category.

5

Jupyter Tricks

http://tfursten.github.io/programming/2015/10/04/jupyter.html

October 4, 2015. Make an Alias to Run the Notebook. Quickly becomes tedious so this is a good candidate for an alias. In my opinion, the ability to use shell commands inside the notebook is the best part of using notebooks. Using these tools allows you to record and reproduce all of the analysis steps exactly. You can run any shell command within the notebook by using the. Ls Out[1]: file1.txt file2.txt file3.txt. The output of the command can be stored as a list. This magic toggles pretty print on/off.

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Lab Members

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Reed A. Cartwrig.ht. Reed A. Cartwright, Assistant Professor and PI. Dr Cartwright (PhD Genetics, University of Georgia) studies a variety of questions in computational evolutionary genetics. Rachel S. Schwartz, Assistant Research Scientist. Dr Schwartz (PhD Ecology, University of California, Davis) is interested in a variety of questions in evolution and bioinformatics. Her current focus is developing methods to determine evolutionary relationships, primarily using next-generation sequencing data (i...

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This post will cover how to set up an R notebook. I discussed the benefits of using notebooks in a previous post. More information can be found here. Requirements Jupyter and a current R installation Installation To install from source for Linux (Ubuntu/Debian) you need zmq development headers. sudo apt-get. October 5, 2015. October 4, 2015. Page 1 of 3. View All Posts by Category. Theme and hosted with.

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