plasmo.ed.ac.uk
PlaSMo - Plant Systems Biology Modelling
http://plasmo.ed.ac.uk/plasmo/new/model.shtml;jsessionid=E1368B8707173E98E145BFDD922F48BF
Plant Systems Biology Modelling. A Database of Plant Growth Models. Please log in first. IBERS, Aberystwyth University. SynthSys, University of Edinburgh. By using this website you are agreeing to the use of cookies as described in our cookies policy.
millar.bio.ed.ac.uk
Millar Lab Funding
http://millar.bio.ed.ac.uk/funding.htm
We are grateful to the following sponsors (past and present). Gatsby Charitable Foundation ( Gatsby. Biotechnology and Biological Sciences Research Council ( BBSRC. EU FP6, EPSRC,. BBSRC, DTI,. Human Frontier Science Programme ( HFSP. Royal Society , ANR-BBSRC joint initiative. BBSRC, Royal Society, British Counci. Including independent fellowships held in the lab: Gatsby, Japanese Society for the Promotion of Science ( JSPS. US Dept. of Energy. Life Sciences Research Foundation ( DoE. European Union ( EU.
plasmo.ed.ac.uk
PlaSMo - Plant Systems Biology Modelling
http://plasmo.ed.ac.uk/plasmo/models/all.shtml;jsessionid=E1368B8707173E98E145BFDD922F48BF
Plant Systems Biology Modelling. A Database of Plant Growth Models. Page 1 of 4. Http:/ www.fsl.orst.edu/mycology/ss/3PG.htm. AFRC Wheat 2 evapw submodel. Penman Evaporation over water ( mm/day ). This is a submodel of AFRC Wheat 2 model in Simile notation (the XML version will follow shortly). AFRC Wheat 2 jdaydif submodel. Number of days between 2 Julian days allowing for change of year and leap years. Assumptions : The gap between the two dates is less than 1 year also JDAY1 is before JDAY2. To calcul...
biodare.ed.ac.uk
About BioDare
https://www.biodare.ed.ac.uk/robust/About2.action;jsessionid=DCAB6A85269498E310506BE9168B0AAB
Stands for Biological Data Repository, its main focus is data from circadian experiments. Repository for experimental data accompanied by extensive metadata including details about environmental conditions and biological material used. Rhythm analysis and period estimation using the six algorithms: FFT NLLS, MFourFit, MESA, ER Periodogram, LS Periodogram, Spectrum Resampling. Generation of secondary data (normalized, detrended, averaged .). Graphical output of data, secondary data and rhythm analysis.
millar.bio.ed.ac.uk
Millar Lab
http://millar.bio.ed.ac.uk/index.htm
Andrew's pages on Edinburgh Research Explorer. News (old news is here. Laura et al. showed flexible timing across species. New Phytol. 2014). 10 models in PlaSMo. Tomasz and Anne compared 6 period analysis methods. All now online on BioDare. With step by step protocols. Meth Mol. Biol. 2014. Daniel and Alexandra's clock-regulated starch degradation. ROBuST project identifies HOS1 as a clock gene ( Plant Cell. ROBuST models rhythmic CBF cold pathways ( Plant Journal. And BMC Cell Bio 2013. To send us video.
millar.bio.ed.ac.uk
Old News archive
http://millar.bio.ed.ac.uk/old_news.htm
Alexandra's P2012 clock model explains TOC1 function and ABA input, BMC Sys Bio 2013. Andrea's machine learning suggests repressilator in Ostreococcus. Elisa's work shows Ostreococcus. Plasticity varies with location. Not relatedness, Nature Climate Change 2013. Congratulations to Gerben van Ooijen. As Royal Society Fellow. Gerben's review of non-transcriptional timing. Published in TiBS 2012. Transformation published in JoVE 2012. Make spatio-temporal waves, in PNAS 2012. Has a new logo, from 2012.
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