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Chiu Laboratory / UCSF-Abbott Viral Diagnostics and Discovery Center (VDDC)

Viral pathogen discovery (Chiu, Current Opinion in Microbiology. What are microarrays and deep sequencing? Chiu and Miller, Microbe. Genomic assays for identification of chikungunya virus in blood donors, Puerto Rico, 2014. Emerging Infectious Diseases 2015. A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the United States from 2012-2014. Clinical Infectious Diseases 2015. Actionable diagnosis of neuroleptospirosis by next-generation sequencing. J Euk Microbiol 2013.

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Chiu Laboratory / UCSF-Abbott Viral Diagnostics and Discovery Center (VDDC) | vddc.ucsf.edu Reviews

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Viral pathogen discovery (Chiu, Current Opinion in Microbiology. What are microarrays and deep sequencing? Chiu and Miller, Microbe. Genomic assays for identification of chikungunya virus in blood donors, Puerto Rico, 2014. Emerging Infectious Diseases 2015. A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the United States from 2012-2014. Clinical Infectious Diseases 2015. Actionable diagnosis of neuroleptospirosis by next-generation sequencing. J Euk Microbiol 2013.

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Chiu Laboratory / UCSF-Abbott Viral Diagnostics and Discovery Center (VDDC) | vddc.ucsf.edu Reviews

https://vddc.ucsf.edu

Viral pathogen discovery (Chiu, Current Opinion in Microbiology. What are microarrays and deep sequencing? Chiu and Miller, Microbe. Genomic assays for identification of chikungunya virus in blood donors, Puerto Rico, 2014. Emerging Infectious Diseases 2015. A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the United States from 2012-2014. Clinical Infectious Diseases 2015. Actionable diagnosis of neuroleptospirosis by next-generation sequencing. J Euk Microbiol 2013.

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vddc.ucsf.edu

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UCSF Research Lab

http://vddc.ucsf.edu/collab.html

We are unable to perform clinical diagnostic testing, and only recommend that patients see their personal physician to discuss available clinical test options. Our center, in conjunction with the UCSF Clinical Microbiology Laboratory, has developed and is in the process of validating new clinical diagnostic tests. One such test is a metagenomic next-generation sequencing (mNGS) test. This web site will be continually updated as new sample types and indications are available for clinical testing.

2

UCSF Research Lab

http://vddc.ucsf.edu/lab.html

Research in the Chiu laboratory focuses on detection of known and novel viral agents. In acute diseases suspected to have an infectious etiology. We use the ViroChip microarray. A viral microarray with 60,000 probes designed to detect all viruses, both known and novel, on the basis of sequence homology. In parallel, we employ next-generation sequencing. The National Research Fund for Tick-Borne Diseases (NRFTD). The University of California Discovery Grant Program. And the Rogers Family Foundation.

3

UCSF Research Lab

http://vddc.ucsf.edu/personnel.html

Charles Chiu, MD/PhD. Associate Professor, Laboratory Medicine. And Medicine / Infectious Diseases. Director of the UCSF Viral Diagnostics and Discovery Center. Assistant Director, UCSF Clinical Microbiology Laboratory. Steve Miller, MD/PhD. Associate Professor, Laboratory Medicine. Director, UCSF Clinical Microbiology Laboratory. Co-Director, UCSF Viral Diagnostics and Discovery Center. Samia Naccache, PhD. Deanna Lee, PhD. Guixia Yu, BS. Research Associate, Chiu Laboratory. Erik Samayoa, BS/CLS. Curren...

4

Press

http://vddc.ucsf.edu/press.html

Click here to collapse newspaper press. Diagnosis of Neuroleptospirosis by Next-Generation Sequencing - the New York Times. In a First, Test of DNA Finds Root of Illness (June 5th, 2014). Quick DNA Tests Crack Medical Mysteries Otherwise Missed (June 5th, 2014). Study Confirms Erroneous Link Between Prostate Cancer and Retrovirus from Mice. Researchers trace back contamination of XMRV in cancer tissue sample (September 18th, 2012). The Final Chapter on XMRV and Prostate Cancer. Don't Use a Broom to Sweep...

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ucdavismagazine.ucdavis.edu

Pandemic busters: Spring 2015: UC Davis Magazine

http://ucdavismagazine.ucdavis.edu/issues/sp15/pandemic_busters.html

Skip directly to: Main page content. From pines to pixels. Send us a letter. Send us a Class Note. Third floor Mrak Hall. University of California, Davis. Davis, CA 95616. Volume 32 Number 2 Spring 2015. On the trail of the next Ebola. The UC Davis-led PREDICT program helps establish and train teams around the world to identify emerging viruses before they become pandemic. What made the difference? Preparedness, for sure, and the help of a UC Davis-led program. PREDICT is funded by the U.S. Agenc...Progr...

cores.ucsf.edu

Array scanner at UCSF? See all 4 options

http://cores.ucsf.edu/array-scanner.html

University of California, San Francisco. Equipment and services for researchers. In partnership with RRP. Array scanner at UCSF. An processed material which acquires images of fluorescence (induced with lasers) from labeled molecules on the surface of the microarray chip. Rarr; Array scanner. Viral Diagnostics and Discovery Center. Laboratory Medicine, China Basin. Agilent 2 um DNA microarray scanner witn enhanced dynamic range. Agilent gene expression array 8x60k, 8x15k, 4x44k. Gladstone, Mission Bay.

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UCSF Research Lab

http://chiulab.ucsf.edu/personnel.html

Charles Chiu, MD/PhD. Associate Professor, Laboratory Medicine. And Medicine / Infectious Diseases. Director of the UCSF Viral Diagnostics and Discovery Center. Assistant Director, UCSF Clinical Microbiology Laboratory. Steve Miller, MD/PhD. Associate Professor, Laboratory Medicine. Director, UCSF Clinical Microbiology Laboratory. Co-Director, UCSF Viral Diagnostics and Discovery Center. Samia Naccache, PhD. Deanna Lee, PhD. Guixia Yu, BS. Research Associate, Chiu Laboratory. Erik Samayoa, BS/CLS. Curren...

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Chiu Laboratory / UCSF-Abbott Viral Diagnostics and Discovery Center (VDDC)

Viral pathogen discovery (Chiu, Current Opinion in Microbiology. What are microarrays and deep sequencing? Chiu and Miller, Microbe. Genomic assays for identification of chikungunya virus in blood donors, Puerto Rico, 2014. Emerging Infectious Diseases 2015. A novel outbreak enterovirus D68 strain associated with acute flaccid myelitis cases in the United States from 2012-2014. Clinical Infectious Diseases 2015. Actionable diagnosis of neuroleptospirosis by next-generation sequencing. J Euk Microbiol 2013.

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