web-cellhts2.dkfz.de

web CellHTS2

Web cellHTS2 dependecies checker. Web cellHTS2 is a front end for cellHTS2 for an end-to-end analysis of cell-based high-throughput screening experiments. The online version allows to analyse single and dual channel experiments using all features of cellHTS2. web cellHTS2 guides the user through all analysis options and outputs a HTML including a full quality control report and a ranked hitlist. A downloadable package for local installation can be found here. Start of a web cellHTS2 session. Plate effect...

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web CellHTS2 | web-cellhts2.dkfz.de Reviews

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Web cellHTS2 dependecies checker. Web cellHTS2 is a front end for cellHTS2 for an end-to-end analysis of cell-based high-throughput screening experiments. The online version allows to analyse single and dual channel experiments using all features of cellHTS2. web cellHTS2 guides the user through all analysis options and outputs a HTML including a full quality control report and a ranked hitlist. A downloadable package for local installation can be found here. Start of a web cellHTS2 session. Plate effect...

<META> KEYWORDS

1 web cellhts2

2 checking dependencies

3 introduction

4 step 1

5 please select

6 single channel

7 dual channel

8 step 2

9 advanced file importer

10 filename parsing

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web cellhts2,checking dependencies,introduction,step 1,please select,single channel,dual channel,step 2,advanced file importer,filename parsing,drop all entries,step 4,median,shorth,mean,negatives,percent of control,normalized percent inhibition,b score

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web CellHTS2 | web-cellhts2.dkfz.de Reviews

https://web-cellhts2.dkfz.de

Web cellHTS2 dependecies checker. Web cellHTS2 is a front end for cellHTS2 for an end-to-end analysis of cell-based high-throughput screening experiments. The online version allows to analyse single and dual channel experiments using all features of cellHTS2. web cellHTS2 guides the user through all analysis options and outputs a HTML including a full quality control report and a ranked hitlist. A downloadable package for local installation can be found here. Start of a web cellHTS2 session. Plate effect...

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web-cellhts2.dkfz.de

1

web CellHTS2

http://web-cellhts2.dkfz.de/cellHTS-java/cellhts2.dropdatafilelist;jsessionid=1wo6b6hjkprskbq8lv4rb8h29

Web cellHTS2 dependecies checker. Web cellHTS2 is a front end for cellHTS2 for an end-to-end analysis of cell-based high-throughput screening experiments. The online version allows to analyse single and dual channel experiments using all features of cellHTS2. web cellHTS2 guides the user through all analysis options and outputs a HTML including a full quality control report and a ranked hitlist. A downloadable package for local installation can be found here. Start of a web cellHTS2 session. Plate effect...

2

web CellHTS2

http://web-cellhts2.dkfz.de/cellHTS-java/cellhts2.configurehtsanalyzer;jsessionid=1wo6b6hjkprskbq8lv4rb8h29

Use GEne List Collection Kegg. Use GEne List Collection GO. Min Gene Set Size. Duplicate Remover Method Set. DKFZ - web CellHTS: 1.0.0-SNAPSHOT Build: 84 cellHTS2 Version: 2.16.0 (R:2.13.1).

3

web CellHTS2

http://web-cellhts2.dkfz.de/cellHTS-java/cellhts2.restartcellhts2page;jsessionid=1wo6b6hjkprskbq8lv4rb8h29

Web cellHTS2 dependecies checker. Web cellHTS2 is a front end for cellHTS2 for an end-to-end analysis of cell-based high-throughput screening experiments. The online version allows to analyse single and dual channel experiments using all features of cellHTS2. web cellHTS2 guides the user through all analysis options and outputs a HTML including a full quality control report and a ranked hitlist. A downloadable package for local installation can be found here. Start of a web cellHTS2 session. Plate effect...

4

web CellHTS2

http://web-cellhts2.dkfz.de/cellHTS-java/cellhts2.nextlink;jsessionid=1wo6b6hjkprskbq8lv4rb8h29

Web cellHTS2 dependecies checker. Error: please select either single or dual channel in the drop down menue. CellHTS2 is a software package implemented in Bioconductor/R for cell-based high-throughput RNAi screens. The cellHTS2 package is an updated version of the cellHTS package, offering a broader set of normalization functionality and the integration of multi-channel screens. A set of example files can be downloaded from the online tutorial here. Start of a web cellHTS2 session. Please choose the norm...

5

web CellHTS2

http://web-cellhts2.dkfz.de/cellHTS-java/cellhts2.showadvancedfileimporter;jsessionid=1wo6b6hjkprskbq8lv4rb8h29

CellHTS2 Advanced File Upload Page. A manual can be found here. A quickstart guide here. A set of example files to upload here. Please use extracted files only). Delete all uploaded Files. Data Files contain Headlines such as Plate, Well, Replicate. Data Files contain Multi Channel Data. Import generated files to web cellHTS2/ go back. DKFZ - web CellHTS: 1.0.0-SNAPSHOT Build: 84 cellHTS2 Version: 2.16.0 (R:2.13.1).

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zbio.org

Publikationen ZBIO

http://www.zbio.org/publikationen.html

Medizinische Fakultät Mannheim. Lehrstuhl für Zell- und Molekularbiologie. Erdmann, G., Suchanek, M., Horn, P., Graf, F., Volz, C., Horn, T., Zhang, X., Wagner, W., Ho, A.D., Boutros, M. (2015). Functional fingerprinting of human mesenchymal stem cells using high-throughput RNAi screening. Genome Medicine. Fischer, B., Sandmann, T., Horn, T., Billmann, M., Chaudhary, V., Huber, W., Boutros, M. (2015). A map of directional genetic interactions in a metazoan cell. Elife. Berns, N., Woichansky, I., ...Tcf7l...

genomernai.org

GenomeRNAi - Download

http://www.genomernai.org/DownloadAllExperimentsForm

GenomeRNAi - a database for RNAi phenotypes and reagents. A file containing data for all screens in GenomeRNAi is available via e-mail. Please use this form to contact us and we'll send you a download link. What characters are shown in the box above? GenomeRNAi is licensed under a Creative Commons Attribution 3.0 Unported License. Download frequent hitter list. Download frequent hitter list. Screen data that have been removed from the database have been archived and can be downloaded here. The download f...

zbio.org

Links ZBIO

http://www.zbio.org/links.html

Medizinische Fakultät Mannheim. Lehrstuhl für Zell- und Molekularbiologie. Abteilung Signalwege und Funktionelle Genomik (B110). Hartmut Hoffmann-Berlin International Graduate School (Excellenzinitiative), Universität Heidelberg. CellNetworks Cluster (Excellenzinitiative), Universität Heidelberg. GenomeRNAi: Datenbank für RNAi-Phänotypen. NEXT-RNAi: Design und Evaluierung von genomweiten RNAi-Bibliotheken. E-RNAi: Design von RNAi-Konstrukten. Web cellHTS2: Statistische Analyse von Screening-Experimenten.

genomernai.dkfz.de

GenomeRNAi - Download

http://genomernai.dkfz.de/DownloadAllExperimentsForm

GenomeRNAi - a database for RNAi phenotypes and reagents. A file containing data for all screens in GenomeRNAi is available via e-mail. Please use this form to contact us and we'll send you a download link. What characters are shown in the box above? GenomeRNAi is licensed under a Creative Commons Attribution 3.0 Unported License. Download frequent hitter list. Download frequent hitter list. Screen data that have been removed from the database have been archived and can be downloaded here. The download f...

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web-cellhts2.dkfz.de

web CellHTS2

Web cellHTS2 dependecies checker. Web cellHTS2 is a front end for cellHTS2 for an end-to-end analysis of cell-based high-throughput screening experiments. The online version allows to analyse single and dual channel experiments using all features of cellHTS2. web cellHTS2 guides the user through all analysis options and outputs a HTML including a full quality control report and a ranked hitlist. A downloadable package for local installation can be found here. Start of a web cellHTS2 session. Plate effect...

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