wotan.lbl.gov

GRIT

A tool for transcript discovery and quantification via the integrated analysis of CAGE, RAMPAGE, RNAseq, and poly(A)-seq data. TUTORIAL (with data-40 MB). Diversity and dynamics of the Drosophila. Genome-guided transcript assembly by integrative analysis of RNA sequence data. Subscribe to the GRIT mailing list:. GRIT is genome-guided a transcript assembly tool designed and implemented by Nathan Boley, in collaboration with the Bickel and Celniker groups. Additional information is available in the README.

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GRIT | wotan.lbl.gov Reviews

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A tool for transcript discovery and quantification via the integrated analysis of CAGE, RAMPAGE, RNAseq, and poly(A)-seq data. TUTORIAL (with data-40 MB). Diversity and dynamics of the Drosophila. Genome-guided transcript assembly by integrative analysis of RNA sequence data. Subscribe to the GRIT mailing list:. GRIT is genome-guided a transcript assembly tool designed and implemented by Nathan Boley, in collaboration with the Bickel and Celniker groups. Additional information is available in the README.

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1 grit

2 code

3 unstable

4 git repository

5 source distribution

6 archives

7 v10 source distribution

8 v01 source distribution

9 documentation

10 readme

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GRIT | wotan.lbl.gov Reviews

https://wotan.lbl.gov

A tool for transcript discovery and quantification via the integrated analysis of CAGE, RAMPAGE, RNAseq, and poly(A)-seq data. TUTORIAL (with data-40 MB). Diversity and dynamics of the Drosophila. Genome-guided transcript assembly by integrative analysis of RNA sequence data. Subscribe to the GRIT mailing list:. GRIT is genome-guided a transcript assembly tool designed and implemented by Nathan Boley, in collaboration with the Bickel and Celniker groups. Additional information is available in the README.

LINKS TO THIS WEBSITE

fruitfly.org

BDGP: Analysis Tools

http://www.fruitfly.org/seq_tools/other.html

Berkeley Drosophila Genome Project. Contact Information, News, Citing BDGP. Clones, Vectors, Stocks, Libraries. A tool for transcript discovery and quantification via the integrated analysis of CAGE, RAMPAGE, RNAseq, and poly(A)-seq data. Search for clusters of transcription factor binding sites. A statistical tool for the prediction of transcription start sites in D. melanogaster. A neural network based program to find possible transcription promoters. Gene finder based on Hidden Markov Models (HMM).

bdgp.org

BDGP: Analysis Tools

http://www.bdgp.org/seq_tools/other.html

Berkeley Drosophila Genome Project. Contact Information, News, Citing BDGP. Clones, Vectors, Stocks, Libraries. A tool for transcript discovery and quantification via the integrated analysis of CAGE, RAMPAGE, RNAseq, and poly(A)-seq data. Search for clusters of transcription factor binding sites. A statistical tool for the prediction of transcription start sites in D. melanogaster. A neural network based program to find possible transcription promoters. Gene finder based on Hidden Markov Models (HMM).

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wotan.lbl.gov

GRIT

A tool for transcript discovery and quantification via the integrated analysis of CAGE, RAMPAGE, RNAseq, and poly(A)-seq data. TUTORIAL (with data-40 MB). Diversity and dynamics of the Drosophila. Genome-guided transcript assembly by integrative analysis of RNA sequence data. Subscribe to the GRIT mailing list:. GRIT is genome-guided a transcript assembly tool designed and implemented by Nathan Boley, in collaboration with the Bickel and Celniker groups. Additional information is available in the README.

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