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Xfam Blog | News about the Pfam, Rfam, TreeFam and Dfam projectsNews about the Pfam, Rfam, TreeFam and Dfam projects
http://xfam.wordpress.com/
News about the Pfam, Rfam, TreeFam and Dfam projects
http://xfam.wordpress.com/
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Xfam Blog | News about the Pfam, Rfam, TreeFam and Dfam projects | xfam.wordpress.com Reviews
https://xfam.wordpress.com
News about the Pfam, Rfam, TreeFam and Dfam projects
xfam.wordpress.com
We’re on the move | Xfam Blog
https://xfam.wordpress.com/2012/11/01/were-on-the-move
News about the Pfam, Rfam, TreeFam and Dfam projects. Pfam 30.0 is available. Rfam 12.1 has been released. Pfam 29.0 is now available. The Rfam Track Hub is back. Laquo; Submit your alignment to Rfam! What’s new in AntiFam? We’re on the move. November 1, 2012. After 15 great years at the Sanger Institute we are on the move. On the 1st November, the Cambridge Xfam group will be taking up residence at the European Bioinformatics Institute. 3 Responses to “We’re on the move”. November 14, 2012 at 9:32 pm.
Dfam 1.3 released | Xfam Blog
https://xfam.wordpress.com/2015/01/07/dfam-1-3-released
News about the Pfam, Rfam, TreeFam and Dfam projects. Pfam 30.0 is available. Rfam 12.1 has been released. Pfam 29.0 is now available. The Rfam Track Hub is back. Laquo; Rfam 12.0 is out. Say hello to Dfam1.4 ». Dfam 1.3 released. January 7, 2015. We are pleased to announce the release of Dfam 1.3. This release includes almost 200 new repeat families and updates the underlying human genome to hg38. New families, new seeds, new genome. Posted by Travis Wheeler and Robert Hubley. Leave a Reply Cancel reply.
Rfam 12.0 is out | Xfam Blog
https://xfam.wordpress.com/2014/09/24/rfam-12-0-is-out
News about the Pfam, Rfam, TreeFam and Dfam projects. Pfam 30.0 is available. Rfam 12.1 has been released. Pfam 29.0 is now available. The Rfam Track Hub is back. Laquo; Moving to xfam.org. Dfam 1.3 released ». Rfam 12.0 is out. September 24, 2014. We are pleased to announce the release of Rfam 12.0! This release contains some major changes when compared with previous releases of Rfam, so please take a minute to read our release notes. Big data, big changes. After lengthy consideration, we have decided n...
The Rfam Track Hub is back | Xfam Blog
https://xfam.wordpress.com/2015/05/14/the-rfam-track-hub-is-back
News about the Pfam, Rfam, TreeFam and Dfam projects. Pfam 30.0 is available. Rfam 12.1 has been released. Pfam 29.0 is now available. The Rfam Track Hub is back. Laquo; Say hello to Dfam1.4. Meet Dfam2.0 ». The Rfam Track Hub is back. May 14, 2015. We are pleased to announce the return of the Rfam Track Hub for the UCSC Genome Browser. This hub is available on our ftp site. The hub prodives annotation for the most recent assemblies eight different species at present: Human (hg38), Mouse (mm10),. Notify ...
Say hello to Dfam1.4 | Xfam Blog
https://xfam.wordpress.com/2015/05/13/say-hello-to-dfam1-4
News about the Pfam, Rfam, TreeFam and Dfam projects. Pfam 30.0 is available. Rfam 12.1 has been released. Pfam 29.0 is now available. The Rfam Track Hub is back. Laquo; Dfam 1.3 released. The Rfam Track Hub is back ». Say hello to Dfam1.4. May 13, 2015. A new benchmark for False Positives, Using GARLIC. Which we have found to be more challenging (and realistic) than reversed sequence. New global ERE and sequence weighting strategies. While being sufficient to find less diverged relatives as well. In whi...
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traviswheelerlab.wordpress.com
Student receives fellowship for summer 2016 | Wheeler Lab
https://traviswheelerlab.wordpress.com/2015/06/09/student-receives-fellowship-for-summer-2016
Computational Biology in Paradise (aka Missoula). Student receives fellowship for summer 2016. June 9, 2015. Alex Nord has just been awarded a Center for Biomolecular Structure and Dynamics Graduate Student Fellowship for the summer of 2016. The fellowship will support Alex while he continues research on using spaced seeds to boost both speed and sensitivity in the context of database search with profile hidden Markov models (in HMMER. Read more at: http:/ news.umt.edu/2015/06/060915cbsd.php.
Armchair Biology: September 2011
http://armchairbiology.blogspot.com/2011_09_01_archive.html
A science blog, by a scientist, mostly about computational biology and plant science, but a little rambly in places. Thursday, 8 September 2011. A Pile of Sheets. In which a niggle with Excel files is easily crushed into nothingness. If you have a Mac. Links to this post. Subscribe to: Posts (Atom). View my complete profile. Really - just really - listen to the bioinformatician for once. Throwing your hands up in the air and fixing your problems with Emacs. A Pile of Sheets. The Martian: Andy Weir.
jalview-rnasupport.blogspot.com
GSOC 2010 - Adding RNA Support to Jalview: Fetching sequences from Rfam
http://jalview-rnasupport.blogspot.com/2010/08/fetching-sequences-from-rfam.html
GSOC 2010 - Adding RNA Support to Jalview. Google Summer of Code 2010. Source Code Hosted by Google. This blog is about my work for the Google Summer of Code 2010. I am working with Jim Procter and Albert Vilella as my mentors to add RNA support to the multiple sequence alignment editor Jalview. Demonstration of GSoC Project. Fetching sequences from Rfam. Random colors for covariation color scheme. MAFFT - multiple sequence alignment. Monday, August 9, 2010. Fetching sequences from Rfam. Id': followed by...
traviswheelerlab.wordpress.com
Say hello to Dfam1.4 | Wheeler Lab
https://traviswheelerlab.wordpress.com/2015/05/13/say-hello-to-dfam1-4
Computational Biology in Paradise (aka Missoula). Say hello to Dfam1.4. May 13, 2015. With Dfam, we are striving to build models of repeat families that yield high sensitivity without undue false annotation. In this release of Dfam, we have improved our model building strategy to reduce the potential for false annotation, especially in the context of overextending alignments around true interspersed repeat instances. Go to the Xfam blog to read the rest … ( Say hello to Dfam1.4. Leave a Reply Cancel reply.
Armchair Biology: What's The Points?
http://armchairbiology.blogspot.com/2014/07/whats-points.html
A science blog, by a scientist, mostly about computational biology and plant science, but a little rambly in places. Sunday, 27 July 2014. In which I talk about points for wins, losses, and draws in rugby league, and how framing of quantitative data is important. This week saw the announcement of major changes to the way that the top levels of rugby league in the UK would operate. Is that Super League (SL) and the Championship (C) currently offer different points for winning, drawing, or losing a game:.
Armchair Biology: ANI are you okay? Are you okay ANI?
http://armchairbiology.blogspot.com/2013/11/ani-are-you-okay-are-you-okay-ani.html
A science blog, by a scientist, mostly about computational biology and plant science, but a little rambly in places. Sunday, 10 November 2013. ANI are you okay? Are you okay ANI? In which I describe Average Nucleotide Identity (ANI), which we can use to pigeonhole bacteria into conceptual boxes labelled as 'species'. And I share more code. Bacterial species status (or any species classification. If so, they're the same species) is a reproductive definition, but bacteria don't really have sex. DDH) has be...
Armchair Biology: KEGGWatch, part III
http://armchairbiology.blogspot.com/2013/02/keggwatch-part-iii.html
A science blog, by a scientist, mostly about computational biology and plant science, but a little rambly in places. Friday, 1 February 2013. KEGGWatch, part III. In which I finally get around to sharing some code, and give some examples of downloading and modifying KEGG pathway maps. As you may have seen in parts I. I've been thinking about writing some Python code to grab, parse, modify, and visualise KGML files. Tl;dr - I wrote it, and it's up here. The module has four main files, KGML parser.py.
Armchair Biology: A Nice New Paradox
http://armchairbiology.blogspot.com/2013/02/a-nice-new-paradox.html
A science blog, by a scientist, mostly about computational biology and plant science, but a little rambly in places. Wednesday, 13 February 2013. A Nice New Paradox. In which I work through a popular statistical puzzle/paradox (with potential implications for interpretation of large data studies). With example code. I like mathematical puzzles, but I don't. The other week, a statistical puzzle on The Skeptics' Guide To The Universe. The parent has at least one boy, they must. I'm going to ruin the puzzle...
Armchair Biology: The Baserate Fallacy, revisited
http://armchairbiology.blogspot.com/2014/07/the-baserate-fallacy-revisited.html
A science blog, by a scientist, mostly about computational biology and plant science, but a little rambly in places. Friday, 11 July 2014. The Baserate Fallacy, revisited. In which I share some iPython code for an interactive demo to calculate and visualise the probability that a positive test implies a positive result. You can get it here. And preview it here. Then I get entangled in a topic outwith my expertise. I was very pleased to be asked to teach on the recent EMBL Plant and Pathogen Genomics.
Armchair Biology: Surely this has been done already...
http://armchairbiology.blogspot.com/2013/02/surely-this-has-been-done-already.html
A science blog, by a scientist, mostly about computational biology and plant science, but a little rambly in places. Friday, 8 February 2013. Surely this has been done already. In which it turns out that if it was done already, it was hiding somewhere. Also, I share a script that retrieves the corresponding nucleotide coding sequences from NCBI, given only a set of protein sequences. Or there's a script in github. Given a protein sequence, find the corresponding nucleotide coding sequence in NCBI. It tur...
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Blog Music de xFam-0us - xFam-0us - Skyrock.com
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Blog de xfam-ous - ... - Skyrock.com
Mot de passe :. J'ai oublié mon mot de passe. Mise à jour :. Abonne-toi à mon blog! N'oublie pas que les propos injurieux, racistes, etc. sont interdits par les conditions générales d'utilisation de Skyrock et que tu peux être identifié par ton adresse internet (23.21.86.101) si quelqu'un porte plainte. Ou poster avec :. Retape dans le champ ci-dessous la suite de chiffres et de lettres qui apparaissent dans le cadre ci-contre. Posté le lundi 09 février 2009 11:26. Poster sur mon blog.
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Xfam Blog | News about the Pfam, Rfam, TreeFam and Dfam projects
News about the Pfam, Rfam, TreeFam and Dfam projects. The Rfam Track Hub is back. May 14, 2015. We are pleased to announce the return of the Rfam Track Hub for the UCSC Genome Browser. This hub is available on our ftp site. The hub prodives annotation for the most recent assemblies eight different species at present: Human (hg38), Mouse (mm10),. Ce10), Chicken (galGal4),. Ci2), Zebrafish (danRer7), Drosophila (dm6) and. Read the rest of this entry ». Say hello to Dfam1.4. May 13, 2015. January 7, 2015.
xFAM00US's blog - THELMAA * - Skyrock.com
LES AAMiS PLUS QUE T0US AU M0NDE (/). 17/02/2010 at 11:15 AM. 05/09/2010 at 7:06 AM. Subscribe to my blog! J'aimerais Juste tous oublier et tous recommencer ! The blog's author only accepts comments from Skyrock members. You haven't logged in. Click here to post a comment using your Skyrock username. And a link to your blog, as well as your photo, will be automatically added to your comment. Posted on Wednesday, 17 February 2010 at 12:17 PM. Edited on Sunday, 05 September 2010 at 3:35 AM. 9829; Pfoulalal...
Blog de xFAM00USS - Evaa (..) - Skyrock.com
Mot de passe :. J'ai oublié mon mot de passe. La vie est courte , qui sait ce que demain nous réserve , la mort , l'Amour . Jusqua present je ne me plein pas , mes amis , ma famille , tout mon bonheur . J'aimerais tellement tomber sur un mec bien . J'veux que sa dure ; j'me suis trop souvent fais avoir , maintenant j'me méfis (! Mise à jour :. Abonne-toi à mon blog! T' ES R0MANTiK , J' SUiS BESTiAL , N0TRE ALCHiMiE EST SPÉCiAAAALE *. A quoi bon continuer ce blog? C'est vrai , apres tout , a quoi bon?
Blog de xfam02us-peaxturs - « PәαxTuurә's » - Skyrock.com
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Music Blog of xFAM0OUS-MUZiiK - » Aallume ton joint &Bouge ton boule sur le refrain. - Skyrock.com
Aallume ton joint &Bouge ton boule sur le refrain. J'irαi αu bout de mes rêves ;. Le soleil se lève,. Tu peux lire sur mes lèvres,. J'n'αi besoin d'αucune αides, αucune poses, αucune trèves. Bon ou mαuvαis élèves,. On est tous les mêmes. 06/05/2009 at 4:55 AM. 14/06/2009 at 4:34 AM. Subscribe to my blog! Aallume ton joint &Bouge ton boule sur le refrain. Add to my blog. Add to my blog. Add to my blog. Add to my blog. Add to my blog. Listen to this track. Add this track to my blog. Some People. (2009).
Blog Music de xFAM0OUS44 - xFAM0OUS44 - Skyrock.com
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