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Michael Q. Zhang's Lab: Courese, Seminars, Meetings and Workshops

Computational Biology and Bioinformatics. Databases and Software Tools.

http://zhangweb.cshl.edu/

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Michael Q. Zhang's Lab: Courese, Seminars, Meetings and Workshops | zhangweb.cshl.edu Reviews
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Computational Biology and Bioinformatics. Databases and Software Tools.
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3 collaborations
4 courses
5 seminars
6 meetings and workshops
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10 research interests
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Michael Q. Zhang's Lab: Courese, Seminars, Meetings and Workshops | zhangweb.cshl.edu Reviews

https://zhangweb.cshl.edu

Computational Biology and Bioinformatics. Databases and Software Tools.

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1

Michael Q. Zhang's Lab: Databases and Software Tools

http://zhangweb.cshl.edu/software/index1.htm

Computational Biology and Bioinformatics. Databases and Software Tools. Arabidopsis thaliana promoter binding element database (public). C elegans Promoter Database. Conserved sequence elements database (public). Laboratory Mammalian Promoter database (public). Transcriptional Regulatory Element Database (public). 8226; Drosophila Promoter and Gene Expression Database (Coming soon). Try one of its components: DBSD: Drosophila Binding Site Database. The Liver Specific Gene Promoter Database.

2

Michael Q. Zhang's Lab: Collaborations

http://zhangweb.cshl.edu/collabor/index1.htm

Computational Biology and Bioinformatics. Databases and Software Tools. Fission yeast gene-finding: Machida. Lab (NIBH) and Yanagida. Alternative Splicing Database Project: Stamm. Lab (Max-Planck) and Nakai. SR Proteins and Their Recognition Motifs: Krainer. Novel Splicing Factors: Mayeda. Splicing Enhancers, CNR gene clusters: Maniatis. Cell cycle regulated genes and promoter elements in yeast. Lab (CSHL), Brown. Tumor Suppressor Loci Project: McCombie. Structure in promoter sequences Trifonov. Maximum ...

3

Michael Q. Zhang's Lab: People

http://zhangweb.cshl.edu/people

Computational Biology and Bioinformatics. Databases and Software Tools. Left row (left to right) - Taken in the summer of 2009. Graduate Student, Stony Brook). Graduate Student, Stony Brook). Back (left to right). Joint Postdoc with Krainer lab). Visiting Scientist, Philips Research). Nila Banerjee (Visiting Scientist, Philips Research). Right row (left to right). Avila Mail (Summer URP, Cornell University). Michael Q. Zhang. Xuxin Chen ( Graduate Student, Stony Brook). Not in the picture:.

4

Michael Q. Zhang's Lab: Links

http://zhangweb.cshl.edu/links/index1.htm

Computational Biology and Bioinformatics. Databases and Software Tools. BioTech (An Interactive Educational Resource and Biotech. Reference Tool). BIMAS: BioInformatics and Molecular Analysis Section (Promoter and Signal Scan, HLA-site). Or IMD: matrix search. Database of Transcription Regulation Regions on Eukaryotic Genomes (TRRD of Kolchanov). DNA Sequece and Structure Analysis Tools (Many blast sites! European Bioinformatics Institute (EBI). GeNet: Gene regulation network database.

5

Michael Q. Zhang's Lab: Publicatons

http://zhangweb.cshl.edu/publications/index1.htm

Computational Biology and Bioinformatics. Databases and Software Tools. Murugan A, Callan CG Jr, Cox EC. (2010) “Using deep sequencing to characterize the biophysical mechanism of a transcriptional regulatory sequence.” PNAS. May 3 [Epub ahead of print]. Wang SM, Zhang MQ. 2010) “Transcriptome study for early hematopoiesis - achievement, challenge and new. Opportunity.” J Cell Physiol 223(3):549-52. Chicas A, Wang X, Zhang C. McCurrach M, Zhao Z, Mert O, Dickins RA, Narita M, Zhang M. Watts JA, Zhang C.

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