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Index of / | amborella.uga.edu Reviews

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INTERNAL PAGES

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Index of /sequenceserver

http://amborella.uga.edu/sequenceserver

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Index of /sequenceserver.prev

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Index of /sequenceserver.prev.

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SequenceServer: Custom BLAST Server

http://amborella.uga.edu/blast

Detected: mixed nucleotide and protein sequences. We can't handle that. Please try one sequence at a time. Amborella EVM 27 Predicted Genes. Amborella Genome Scaffolds V1.0. Amborella RNASeq Trinity Assembly. Amborella V4 EST Assembly. Amborella EVM 27 Predicted Proteins. Evalue Real Expectation value (E) threshold for saving hits Default = '10'. Word size Integer, =2 Word size for wordfinder algorithm. Gapopen Integer Cost to open a gap. Gapextend Integer Cost to extend a gap. Restrict search or results.

4

Random Amborella Genes

http://amborella.uga.edu/ambo_random_list.html.back

If you see a grayed out login window, try the tab key to access the login box or try a different browser. This is a problem with some versions of Firefox. Exporting Data to GFF3 format. General Information on GBrowse. The Amborella GBrowse Setup. The following is a list of 100 randomly selected EVM predicted genes. Clicking on the name below will open up the location containing the gene model in the genome view panel on the right. EVM Genes For Curation.

5

Amborella 2 BAC Contigs: 100 kbp from Contig15:1..100,000

http://amborella.uga.edu/mgb2/gbrowse/amborella

Dump selection as FASTA. Submit selection to UCSC BLAT. Submit selection to NCBI BLAST. Help with this browser. Show my user ID. Log in / create account. Amborella 2 BAC Contigs: 100 kbp from Contig15:1.100,000. Download Decorated FASTA File. Amborella 2 BAC Contigs. Show Active Tracks Only. BLASTN-Amborella Unigenes v 4.0. Help with uploading custom tracks]. There are no tracks yet. Add custom tracks : [From text]. Highlight feature(s) (feature1 feature2.). Or visit the GMOD Project.

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