aug2014.archive.ensembl.org

Ensembl Genome Browser

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Archive EnsEMBL species. Other species are available in Ensembl. ENCODE data in Ensembl.

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Ensembl Genome Browser | aug2014.archive.ensembl.org Reviews

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Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Archive EnsEMBL species. Other species are available in Ensembl. ENCODE data in Ensembl.

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Ensembl Genome Browser | aug2014.archive.ensembl.org Reviews

https://aug2014.archive.ensembl.org

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Archive EnsEMBL species. Other species are available in Ensembl. ENCODE data in Ensembl.

INTERNAL PAGES

aug2014.archive.ensembl.org

1

Variants for my gene

http://aug2014.archive.ensembl.org/info/website/tutorials/gene_snps.html

Compare genes across species. Variants for my gene. ENCODE data in Ensembl. Use my own data. Variants for my gene. SNPs and other variants for my gene. Find short variants for a gene from dbSNP, COSMIC, and other sources. In the Gene Variation table. Variants are grouped into consequence types. Click on 'Show' to reveal a table of variant IDs. For a specific consequence type. Gene Variation Table help page. View variants within the nucleotide sequence in the Gene Sequence. Gene Sequence help page.

2

Compare genes across species

http://aug2014.archive.ensembl.org/info/website/tutorials/compara.html

Compare genes across species. Variants for my gene. ENCODE data in Ensembl. Use my own data. Compare genes across species. Compare genes across species. Gene Trees and Homologues. A representative protein for every gene in Ensembl across all species is used to determine gene trees. Homologues are separated into Orthologues. Across different species) and Paralogues. Gene Tree help page. Gene trees and homology. Compare species in the genomic alignment view. Or the conservation track in Region in Detail:.

3

Ensembl Tools

http://aug2014.archive.ensembl.org/info/docs/tools/index.html

We provide a number of ready-made tools for processing both our data (Biomart and the Virtual machine) and yours. For the latter:. The VEP processes jobs via a ticketing system and can handle medium to large files (up to 50Mb). For other jobs, only small datasets of up to 5Mb can be uploaded and processed online. We aim to extend the ticketing system used for VEP to these tools. For larger datasets we provide an API script that can be downloaded (you will also need to install our Perl API.

4

What's New in this release

http://aug2014.archive.ensembl.org/info/website/news.html

Coordinate Systems for custom tracks. Compare genes across species. Variants for my gene. ENCODE data in Ensembl. Use my own data. Browse News by Topic. What's New in this release. Archives: Table of assemblies. Archive of previous news. What's New in this release. Archive EnsEMBL News for Release 76 (August 2014). Updated human assembly to GRCh38. New species: Amazon molly. New web displays and tools. New species, assemblies and genebuilds. New web displays and tools. New BLAST interface (all species).

5

Ensembl genome browser 76: Homo sapiens - Description

http://aug2014.archive.ensembl.org/Homo_sapiens/Info/Index

What's New in Human release 76. Update to Ensembl-Havana GENCODE gene set (release 20). Human: assembly updated to GRCh38. Update variation data to GRCh38. Genome assembly: GRCh38 (GCA 000001405.15). More information and statistics. Convert your data to GRCh38 coordinates. Display your data in Archive EnsEMBL. GRCh37 (Long-term archive with BLAST, VEP and BioMart). GRCh37.p13 (Archive EnsEMBL release 75). NCBI 36 (Archive EnsEMBL release 54). What can I find? More about this genebuild. What can I find?

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grch37.ensembl.org

Help - Homo sapiens - GRCh37 Archive browser 86

http://grch37.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014.

asia.ensembl.org

Help - Homo sapiens - Ensembl genome browser 85

http://asia.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014. Ensembl 76: Aug 2014.

mar2015.archive.ensembl.org

Ensembl genome browser 79: Homo sapiens - - Help

http://mar2015.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 86: Oct 2016. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014.

jul2015.archive.ensembl.org

Ensembl genome browser 81: Homo sapiens - - Help

http://jul2015.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 86: Oct 2016. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014.

ensembl.org

Archives

http://www.ensembl.org/info/website/archives/index.html

Archives: Table of assemblies. List of currently available archives. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 85: Jul 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. Ensembl 80: May 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. Ensembl 76: Aug 2014. Ensembl 75: Feb 2014. Ensembl 74: Dec 2013. Ensembl 73: Sep 2013. Ensembl 67: May 2012. Ensembl 54: May 2009. Table of archives showing assemblies present in each one.

gencodegenes.org

GENCODE - Release History

http://www.gencodegenes.org/mouse_releases

How to Access Data. The Mouse GENCODE Gene Set - Release history. Merge between Havana annotation and Ensembl gene set in GRCm38 assembly. M9 (current for GRCm38). Merge between Havana annotation and Ensembl gene set in GRCm38 assembly. Merge between Havana annotation and Ensembl gene set in GRCm38 assembly. Merge between Havana annotation and Ensembl gene set in GRCm38 assembly. Merge between Havana annotation and Ensembl gene set in GRCm38 assembly. Month of the Havana data cutoff.

gencodegenes.org

GENCODE - Release History

http://www.gencodegenes.org/releases

How to Access Data. The Human GENCODE Gene Set - Release history. Re-merge with new Havana annotation, updated Ensembl gene set. 24 (current for GRCh38). Re-merge with new Havana annotation, updated Ensembl gene set. Re-merge with new Havana annotation, updated Ensembl gene set. Re-merge with new Havana annotation, updated Ensembl gene set. Re-merge with new Havana annotation, updated Ensembl gene set. Full new Ensembl gene build and merge with Havana in GRCh38. 19 (current for GRCh37). Automated merge o...

useast.ensembl.org

Help - Homo sapiens - Ensembl genome browser 85

http://useast.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014. Ensembl 76: Aug 2014.

ensembl.org

Help - Homo sapiens - Ensembl genome browser 85

http://www.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014. Ensembl 76: Aug 2014.

oct2014.archive.ensembl.org

Ensembl genome browser 77: Homo sapiens - - Help

http://oct2014.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Archive 86: Oct 2016. Archive 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Archive 84: Mar 2016. Archive 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Archive 82: Sep 2015. Archive 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Archive 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Archive 79: Mar 2015. Archive 78: Dec 2014.

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aug2014.archive.ensembl.org

Ensembl Genome Browser

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Archive EnsEMBL species. Other species are available in Ensembl. ENCODE data in Ensembl.

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