mar2015.archive.ensembl.org

Ensembl Genome Browser

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Other species are available in Ensembl. ENCODE data in Ensembl. In your o...

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Ensembl Genome Browser | mar2015.archive.ensembl.org Reviews

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Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Other species are available in Ensembl. ENCODE data in Ensembl. In your o...

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Ensembl Genome Browser | mar2015.archive.ensembl.org Reviews

https://mar2015.archive.ensembl.org

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Other species are available in Ensembl. ENCODE data in Ensembl. In your o...

INTERNAL PAGES

mar2015.archive.ensembl.org

1

ENCODE data in Ensembl

http://mar2015.archive.ensembl.org/info/website/tutorials/encode.html

Compare genes across species. Variants for my gene. ENCODE data in Ensembl. Use my own data. ENCODE data in Ensembl. ENCODE data in Ensembl. ENCODE data in Ensembl. How to view ENCODE data. Multiple data tracks relating to gene regulation, based on ENCODE data can be turned on in the ' region in detail. Page on our GRCh37 archive for human and mouse. A full tutorial on how to use these tracks. Is available on the EBI website. Link to add ENCODE integrative analysis hub. Removing the track hub. Is an inte...

2

Ensembl genome browser 79: Homo sapiens - - Help

http://mar2015.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 86: Oct 2016. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014.

3

Public trackhubs

http://mar2015.archive.ensembl.org/info/website/public_trackhubs.html

Coordinate Systems for custom tracks. Compare genes across species. Variants for my gene. ENCODE data in Ensembl. Use my own data. Browse News by Topic. What's New in this release. Archives: Table of assemblies. If you wish to use a hub not on our list, please see our online instructions on how to attach a hub. Please note that tracks are not turned on by default, as there can be thousands in a hub. The link will open the control panel at the correct menu, where you can turn on individual tracks. Chimpan...

4

Diseases and Phenotypes

http://mar2015.archive.ensembl.org/info/website/tutorials/phenotype.html

Compare genes across species. Variants for my gene. ENCODE data in Ensembl. Use my own data. Learn about a disease or phenotype. Phenotypes such as diseases and traits are associated to genes or variants in Ensembl. A list of all phenotypes for human. And other species can be found on our website. See the variation phenotype help. And the gene phenotype help. For sources of phenotype associations , which include OMIM, dbSNP, Orphanet, COSMIC and more. Link in the left hand menu. View in current Ensembl.

5

Ensembl: Downloads

http://mar2015.archive.ensembl.org/downloads.html

Download a sequence or region. Click on the 'Export data' button in the lefthand menu of most pages to export:. GTF or GFF features. Custom datasets can be retrieved using the BioMart data-mining tool. You may find exploring this web-based query tool easier than extracting information direct from our databases. Write your own Perl scripts to retrieve small-to-medium datasets. All our data, as well as added functionality, is available through the Ensembl Perl API. You can also use our REST API.

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grch37.ensembl.org

Help - Homo sapiens - GRCh37 Archive browser 86

http://grch37.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014.

asia.ensembl.org

Help - Homo sapiens - Ensembl genome browser 85

http://asia.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014. Ensembl 76: Aug 2014.

jul2015.archive.ensembl.org

Ensembl genome browser 81: Homo sapiens - - Help

http://jul2015.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 86: Oct 2016. Ensembl 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014.

ensembl.org

Archives

http://www.ensembl.org/info/website/archives/index.html

Archives: Table of assemblies. List of currently available archives. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 85: Jul 2016. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. Ensembl 80: May 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. Ensembl 76: Aug 2014. Ensembl 75: Feb 2014. Ensembl 74: Dec 2013. Ensembl 73: Sep 2013. Ensembl 67: May 2012. Ensembl 54: May 2009. Table of archives showing assemblies present in each one.

gencodegenes.org

GENCODE - Release History

http://www.gencodegenes.org/mouse_releases

How to Access Data. The Mouse GENCODE Gene Set - Release history. Merge between Havana annotation and Ensembl gene set in GRCm38 assembly. M9 (current for GRCm38). Merge between Havana annotation and Ensembl gene set in GRCm38 assembly. Merge between Havana annotation and Ensembl gene set in GRCm38 assembly. Merge between Havana annotation and Ensembl gene set in GRCm38 assembly. Merge between Havana annotation and Ensembl gene set in GRCm38 assembly. Month of the Havana data cutoff.

gencodegenes.org

GENCODE - Release History

http://www.gencodegenes.org/releases

How to Access Data. The Human GENCODE Gene Set - Release history. Re-merge with new Havana annotation, updated Ensembl gene set. 24 (current for GRCh38). Re-merge with new Havana annotation, updated Ensembl gene set. Re-merge with new Havana annotation, updated Ensembl gene set. Re-merge with new Havana annotation, updated Ensembl gene set. Re-merge with new Havana annotation, updated Ensembl gene set. Full new Ensembl gene build and merge with Havana in GRCh38. 19 (current for GRCh37). Automated merge o...

useast.ensembl.org

Help - Homo sapiens - Ensembl genome browser 85

http://useast.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014. Ensembl 76: Aug 2014.

ensembl.org

Help - Homo sapiens - Ensembl genome browser 85

http://www.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Ensembl 84: Mar 2016. Ensembl 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Ensembl 82: Sep 2015. Ensembl 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Ensembl 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Ensembl 79: Mar 2015. Ensembl 78: Dec 2014. Ensembl 77: Oct 2014. GRCh38) - patched/updated gene set Aug 2014. Ensembl 76: Aug 2014.

aug2014.archive.ensembl.org

Ensembl genome browser 76: Homo sapiens - - Help

http://aug2014.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Archive EnsEMBL 86: Oct 2016. Archive EnsEMBL 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Archive EnsEMBL 84: Mar 2016. Archive EnsEMBL 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Archive EnsEMBL 82: Sep 2015. Archive EnsEMBL 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Archive EnsEMBL 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015.

oct2014.archive.ensembl.org

Ensembl genome browser 77: Homo sapiens - - Help

http://oct2014.archive.ensembl.org/Help/ArchiveList

The following archives are available for this page:. Full Feb 2014 archive with BLAST, VEP and BioMart. Archive 86: Oct 2016. Archive 85: Jul 2016. GRCh38.p7) - patched/updated gene set Jun 2016. Archive 84: Mar 2016. Archive 83: Dec 2015. GRCh38.p5) - patched/updated gene set Oct 2015. Archive 82: Sep 2015. Archive 81: Jul 2015. GRCh38.p3) - patched/updated gene set Jun 2015. Archive 80: May 2015. GRCh38.p2) - patched/updated gene set Jan 2015. Archive 79: Mar 2015. Archive 78: Dec 2014.

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Ensembl Genome Browser

Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Other species are available in Ensembl. ENCODE data in Ensembl. In your o...

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Or coronary heart disease. The Ensembl project produces genome databases for vertebrates and other eukaryotic species, and makes this information freely available online. For easy access to commonly used genomes, drag from the bottom list to the top one · Save. Chinese softshell turtle (. Lesser hedgehog tenrec (. Middot; Restore default list. Log in to customize this list. Select a species -. View full list of all Ensembl species. Other species are available in Ensembl. Please use the cache. All web upd...

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