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Gene Expression Evolution
http://bgeedb.wordpress.com/
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bgeedb | Gene Expression Evolution | bgeedb.wordpress.com Reviews
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Gene Expression Evolution
Rolling out Bgee 13, from 5 to 17 species with gene expression calls | bgeedb
https://bgeedb.wordpress.com/2014/12/19/rolling-out-bgee-13-from-5-to-17-species-with-gene-expression-calls
New taxon Dipnotetrapodomorpha in NCBI taxonomy. 10 million calls of differential gene expression for 11 species, from #RNAseq and #microarray →. Rolling out Bgee 13, from 5 to 17 species with gene expression calls. December 19, 2014. We are proud to be rolling out the new and improved Bgee over the next weeks! Welcome to release 13. In the 2 years since our last release, we have transferred all our annotations to the bilaterian ontology Uberon. Developmental stage modeling collaboration on Github. For P...
Wait! That’s actually the same data… | bgeedb
https://bgeedb.wordpress.com/2012/08/28/wait-thats-actually-the-same-data
New release of Bgee: extra clean transcriptome data. Expressed, or not expressed? That is the question! That’s actually the same data. August 28, 2012. GEO) you identify four different experiments ( GSE13904. If this redundancy of samples is not explicitly stated on GEO, how did we come to notice it? Well, sometimes the redundancy is evident. The sample ID and the name of the data files are identical between experiments. For example it’s clear that sample GSM2334. Belongs to experiments GSE75. This promp...
bgeedb | bgeedb
https://bgeedb.wordpress.com/author/bgeedb
This is the blog of the database of gene expression evolution Bgee, at University of Lausanne and Swiss Institute of Bioinformatics. http:/ www.bgee.org/. New gene page, new Bgee interface. March 11, 2016. Yesterday we have released a major update of our web interface: The download functionality remains the same, as does the data (processing for the next release is just starting with the new Ensembl release we love Ensembl). It’s just easier … Continue reading →. March 7, 2016. March 2, 2016. In a recent...
New taxon Dipnotetrapodomorpha in NCBI taxonomy | bgeedb
https://bgeedb.wordpress.com/2013/05/29/new-taxon-dipnotetrapodomorpha-in-ncbi-taxonomy
Expressed, or not expressed? That is the question! Rolling out Bgee 13, from 5 to 17 species with gene expression calls →. New taxon Dipnotetrapodomorpha in NCBI taxonomy. May 29, 2013. For the annotation of homologies in Bgee, we are presently curating in Uberon. The taxonomic level at which each homologous relation is correct. For example,. Is homologous accross Metazoa, while. Is only homologous among Mammalia. For this, we use NCBI taxonomy IDs. We thus wrote the following email to NCBI:. The standar...
bgeedb | Gene Expression Evolution | Page 2
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Newer posts →. TopAnat: GO-like enrichment of anatomical terms mapped to genes by expression patterns. November 24, 2015. Update: This was the first blogpost on TopAnat. There are now quite a few more, under the tag TopAnat. We are glad to roll out the first public beta version of our new tool, TopAnat:. TopAnat uses the classical GO-enrichment approach (specifically, from TopGO. The ontology used described anatomy rather than gene function;. Weigth (update: now by default). Loading can be a bit slow):.
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Welcome to Bgee: a dataBase for Gene Expression Evolution
TopAnat: Expression enrichment analysis. How to access Bgee data. TopAnat: Expression enrichment analysis. Gene expression data in animals. Bgee is a database to retrieve and compare gene expression patterns in multiple animal species, produced from multiple data types (RNA-Seq, Affymetrix,. Hybridization, and EST data). Species with data in Bgee (click on species to see more details). See RNA-Seq and Affymetrix data. See gene expression calls. News (features are being added incrementally). Addition of c...
Welcome on Bgee: a dataBase for Gene Expression Evolution
Bgee: Gene Expression Evolution. Welcome on the latest release of Bgee, Bgee release 13. Features are being added incrementally:. 2015-04-16: release of the multi-species differential expression data (across anatomy) for 6 groups, see download page. 2015-03-03: release of the single-species differential expression data for 11 species, see download page. 2014-12-19: release of the single-species expression data for 17 species, see download page. You can follow us on twitter. Back to the Top.
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bgeedb | Gene Expression Evolution
New gene page, new Bgee interface. March 11, 2016. Yesterday we have released a major update of our web interface:. The download functionality remains the same, as does the data (processing for the next release is just starting with the new Ensembl release. We love Ensembl). It’s just easier to find and use (we hope! Feedback welcome at bgee@sib.swiss. We also rolled out some improvements in TopAnat. Clearer access to documentation;. Clearer access to example datasets;. Presented above, is expressed in 6...
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Energy Efficiency and Renewable Sources Fund. For Clients / Procedures. Documents and Application Forms. National Academy of Music Prof.P.Vladigerov Sofia. Mityo Stanev Primary School, the town of Stara Zagora. Agricultural University Rectorate, Plovdiv. StSt Kiril and Metodii Veliko Tyrnovo University, block 11. Veliko Tyrnovo University St.St.Kiril and Metodii, block 7. Vitosha Factory, wool corps in the town of Sofia. Building of “Vitosha Factory Wool Corps” in the. Summer Theather, Burgas Municipality.
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My talk on Building Growing Teams from TechEd NZ 2014. View all the other videos. My talk on Azure and Chef from TechEd NZ 2014. View all the other videos. Source: channel9.msdn.com. Azure File Storage and Ubuntu SMB. I’ve been playing around with the new/preview Azure File Storage service http:/ blogs.msdn.com/b/windowsazurestorage/archive/2014/05/12/introducing-microsoft-azure-file-service.aspx. And have had a few issues I’ve had to overcome along the way. Creating a share from OS X. Tested on ubuntu 1...
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