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CHIPSTER.CSC.FI

Chipster

Chipster is a user-friendly software for analyzing high-throughput data such as NGS and microarrays. It contains over 360 analysis tools and a large collection of reference genomes. Users can save and share automatic analysis workflows, and visualize data interactively using for example the built-in genome browser. Free of charge. If you would like to use Chipster running on CSC's server, you need a user account. Launch Chipster v3.12. Or launch with more memory: 3 GB. 25102017 Version 3.12 released.

http://chipster.csc.fi/

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Chipster | chipster.csc.fi Reviews
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Chipster is a user-friendly software for analyzing high-throughput data such as NGS and microarrays. It contains over 360 analysis tools and a large collection of reference genomes. Users can save and share automatic analysis workflows, and visualize data interactively using for example the built-in genome browser. Free of charge. If you would like to use Chipster running on CSC's server, you need a user account. Launch Chipster v3.12. Or launch with more memory: 3 GB. 25102017 Version 3.12 released.
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1 getting access
2 analysis tool content
3 screenshots
4 manual
5 tutorial videos
6 cite
7 for developers
8 open source project
9 tool editor
10 welcome to chipster
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Chipster | chipster.csc.fi Reviews

https://chipster.csc.fi

Chipster is a user-friendly software for analyzing high-throughput data such as NGS and microarrays. It contains over 360 analysis tools and a large collection of reference genomes. Users can save and share automatic analysis workflows, and visualize data interactively using for example the built-in genome browser. Free of charge. If you would like to use Chipster running on CSC's server, you need a user account. Launch Chipster v3.12. Or launch with more memory: 3 GB. 25102017 Version 3.12 released.

INTERNAL PAGES

chipster.csc.fi chipster.csc.fi
1

Chipster

https://chipster.csc.fi/troubleshooting.shtml

Please find below answers to some technical issues regarding the Chipster client software. For problems with Chipster server installation, please see the Technical manual at the GitHub site. If you have questions about using or installing Chipster, we encourage you to email our community mailing lists. Chipster doesn't start on my Mac, what should I do? Please see the detailed instructions for Mac. Java Webstart is not among the applications in the browser's prompt. 2) Open Java version verification page.

2

Chipster

https://chipster.csc.fi/news_archive.shtml

2652016 13:00 - 13:15 EEST Maintenance service break. 2232016 Version 3.8 released. 1412016 Version 3.7 released. 1122015 RNA-seq data analysis, University of Helsinki. 16112015 RNA-seq data analysis. 11112015 NGS data analysis. 9112015 RNA-seq data analysis. 29102015 RNA-seq data analysis. 26-2710.2015 RNA-seq data analysis, Biomedicum. 2102015 Version 3.6 released. 299 and 5.10.2015 Variant analysis, Biomedicum. 1892015 RNA-seq data analysis, Ljubljana. TT15 at the ISMB in Dublin. 24-252.2014 Micro...

3

Chipster

https://chipster.csc.fi/access.shtml

Getting access to Chipster. If you would like to use Chipster to analyze your data, you have two options:. Setting up a Chipster server at your institute. This is free of charge, but you need an IT person to help you and suitable computing resources to run the server. The actual installation is easy, because Chipster is available as a ready-to-use virtual machine image. Use our Chipster server at CSC. Users from Finnish universities. Users from other universities and non-profit organizations. One year pe...

4

Chipster manual

https://chipster.csc.fi/manual/genomeBrowser.html

Chipster genome browser visualization. Chipster genome browser enables you to view next generation sequencing data and results in their genomic context using Ensembl annotations. You can zoom in to nucleotide level, highlight SNPs, view automatically calculated coverage and visualize BED scores and copy number aberrations. Data import: file formats, preprocessing. Selecting files and annotations to be visualized. Navigating and viewing options. Viewing at different zoom levels. Viewing copy number data.

5

Chipster manual

https://chipster.csc.fi/manual/newVersion.html

Version update 23.5.2016: What is new in Chipster 3.9.0. This version mainly contains internal changes to the way how tool scripts are distributed on the server side. Chipster client application now requires Java 1.8 or later. Tool scripts are moved from computing services to a centralised toolbox service. Improvements to analysis tools. Now accepts multiple inputs. Version update 4.5.2016: What is new in Chipster 3.8.1. This version contains a bug fix for the tool Differential expression using DESeq2.

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seqahead.cs.tu-dortmund.de seqahead.cs.tu-dortmund.de

wgs:wg3:start (SeqAhead)

http://seqahead.cs.tu-dortmund.de/wgs:wg3:start

Design and implementation of software or software platforms for efficient and versatile analysis of next generation sequencing data. Links to existing tools are posted below. Please try to keep the list organized. Removing known adapters before mapping. Mapping exactly reads without genome indexing. Indexing collections of reads (library). Biologist-friendly NGS data analysis and visualization software. Eija Korpelainen et al. Regulatory Sequence Analysis Tools software suite. Jacques van Helden et al.

emboss.open-bio.org emboss.open-bio.org

EMBOSS Users Guide

http://emboss.open-bio.org/html/use/index.html

EMBL European Bioinformatics Institute. EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. EMBL European Bioinformatics Institute. EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. EMBL European Bioinformatics Institute. EMBL-EBI, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. 1 Introduction to EMBOSS. 3 About the Authors. 4 How To Cite EMBOSS. Conventions used in the Manual. 1 Command Line Sessions and Commands. 2 Program Listings and Code.

jstacs.de jstacs.de

Dimont - Jstacs

http://www.jstacs.de/index.php/Dimont

By Jan Grau, Stefan Posch, Ivo Grosse, and Jens Keilwagen. Dimont is a universal tool for de-novo motif discovery. Dimont has successfully been applied to ChIP-seq, ChIP-exo and protein-binding microarray (PBM) data. We provide Dimont as a public web-server, a web-application that can be installed in a local Galaxy server, and as a command line program. Dimont @ Galaxy toolshed. Running the command line application. If you use Dimont, please cite. 41(21):e197, 2013. doi: 10.1093/nar/gkt831. Home director...

altanalyze.org altanalyze.org

AltAnalyze Analysis Pipeline

http://www.altanalyze.org/help.htm

AltAnalyze Information and Instructions. Section 1 - Introduction. AltAnalyze (http:/ altanalyze.org) is a freely available, cross-platform application designed to assess changes in protein sequence, domain composition, and microRNA targeting from user RNA sequencing ( RNA-Seq. Http:/ code.google.com/p/altanalyze. Figure 1.1. AltAnalyze Overview. Simplified graphic illustration of the analysis steps and output files produced by AltAnalyze. ORA, over-representation analysis. A minimum of 1GB of RAM and In...

elixir-finland.org elixir-finland.org

Elixir

http://www.elixir-finland.org/palvelut/virtuaaliset-koneet

Biotieteellisten kokeiden tuottama data kaksinkertaistuu nykyään muutaman kuukauden välein, ja määrä on edelleen kasvussa. Lisäksi kokeet tuottavat aivan uudenlaista dataa, jota pitäisi käsitellä järkevällä tavalla. ELIXIR rakentaa Eurooppaan biologisen informaation infrastruktuurin bioalan tutkimuksen tueksi. Tuloksia hyödynnetään lääketieteessä ja ympäristön tutkimuksessa. Suomen ELIXIR-keskus tarjoaa Suomessa kehitettyjä lääketieteen ja bioinformatiikan työkaluja. Täältä saa myös ELIXIRin jäsenorg...

elixir-finland.org elixir-finland.org

Elixir

http://www.elixir-finland.org/yhteistyokumppanit

Biotieteellisten kokeiden tuottama data kaksinkertaistuu nykyään muutaman kuukauden välein, ja määrä on edelleen kasvussa. Lisäksi kokeet tuottavat aivan uudenlaista dataa, jota pitäisi käsitellä järkevällä tavalla. ELIXIR rakentaa Eurooppaan biologisen informaation infrastruktuurin bioalan tutkimuksen tueksi. Tuloksia hyödynnetään lääketieteessä ja ympäristön tutkimuksessa. Suomen ELIXIR-keskus tarjoaa Suomessa kehitettyjä lääketieteen ja bioinformatiikan työkaluja. Täältä saa myös ELIXIRin jäsenorg...

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chipster-creates (Chipster) - DeviantArt

Window.devicePixelRatio*screen.width 'x' window.devicePixelRatio*screen.height) :(screen.width 'x' screen.height) ; this.removeAttribute('onclick')" class="mi". Window.devicePixelRatio*screen.width 'x' window.devicePixelRatio*screen.height) :(screen.width 'x' screen.height) ; this.removeAttribute('onclick')". Join DeviantArt for FREE. Forgot Password or Username? Digital Art / Student. Deviant for 2 Years. This deviant's full pageview. Last Visit: 111 weeks ago. By moving, adding and personalizing widgets.

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Chipster-life's blog - Petite vie de Chipster de Belin - Skyrock.com

Petite vie de Chipster de Belin. Live The Life Y've Imagined. 19/11/2008 at 1:59 AM. 13/04/2011 at 6:45 AM. Subscribe to my blog! Habite : Dans ma nouvelle maison à la campagne. Avec : Mon chéri et mes 3 monstres. Emploi : Assistante juridique en responsabilité civile médicale plus pour très longtemps. Quoi dire de plus? J'aime rire. (comme le prouve la photo. Please enter the sequence of characters in the field below. Posted on Wednesday, 19 November 2008 at 2:02 AM. Sunset toujours très en forme! Don't...

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Blog de chipster-man - Memoire of My Life - Skyrock.com

Mot de passe :. J'ai oublié mon mot de passe. Memoire of My Life. Mon blog à moi et à personne d'autre. Mise à jour :. J'ai décidé de créer mon propre blog de A. Abonne-toi à mon blog! J'ai décidé de créer mon propre blog de A à Z histoire de m'entrainer un peu à la programmation et aussi parce que skyblog c'est un peu trop restrictif. Donc voilà, c'est la même chose mais en fait maison et ça se passe ici maintenant :. Http:/ chipster.free.free.fr/blog/. Ou poster avec :. Notte Prima degli esami. La stor...

chipster-only.skyrock.com chipster-only.skyrock.com

Blog de chipster-only - L'argent ne fait pas le bonheur en voici la preuve - Skyrock.com

Mot de passe :. J'ai oublié mon mot de passe. L'argent ne fait pas le bonheur en voici la preuve. Lache des com's! Mise à jour :. Abonne-toi à mon blog! I love you too my beste. N'oublie pas que les propos injurieux, racistes, etc. sont interdits par les conditions générales d'utilisation de Skyrock et que tu peux être identifié par ton adresse internet (67.219.144.170) si quelqu'un porte plainte. Ou poster avec :. Posté le samedi 14 avril 2007 05:07. Modifié le samedi 14 avril 2007 10:08. N'oublie pas q...

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www.chipster.biz

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Chipster

Chipster is a user-friendly software for analyzing high-throughput data such as NGS and microarrays. It contains over 360 analysis tools and a large collection of reference genomes. Users can save and share automatic analysis workflows, and visualize data interactively using for example the built-in genome browser. Free of charge. If you would like to use Chipster running on CSC's server, you need a user account. Launch Chipster v3.12. Or launch with more memory: 3 GB. 25102017 Version 3.12 released.

chipster.de chipster.de

Home :: Chipster

Deutsch | english. Eindeutige Produktkennzeichnung in den Bereichen:. Überzeugen Sie sich vom Chipster im Wettbewerbsvergleich. Diese Unternehmen haben den Chipster bereits im Einsatz. CHIPSTER - Die smarte RFID-Lösung. Einige Vorteile einer Identifizierung mittels Chipster:. Papierbezogene Inspektion und Dokumentation entfallen. Einfache Identifizierung und Lokalisierung von Produkten. Verwaltung von Inspektion und Wartungsarbeiten wird erleichtert. Zuverlässiger Betrieb selbst in rauer Umgebung. Besond...

chipster.mistral.co.uk chipster.mistral.co.uk

Chipsters Mistral Page

Chipsters Mistral Anime Site. Warning Loads of Anime behind these links.Planet Chipster has touched down! Sakura Welcomes you to Chipsters Web site! Well now that your here make a choice. So make one! Oh yeah I thought I'd better tell you that. This site has midi music and animated graphics too. Hey and no viewing fee to watch out for. Two choices so choose ONE.

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Chipster.net

After years of dormancy, it’s time to. Inject a little life back into CHIPSTER.NET. Click below for new books or see all. Available in the Publishings section above. I cobbled together an Illegal Gambling Matchbooks. Research guide. Its available for. In the Publishings section. I have also included other material such as the presentation from the Illegal Seminar of the Year. Given by myself and Gene Trimble at the 2012 CC&GTCC Convention. Jump to Publishings page. Illegal Seminar of the Year.

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Chipster Automotive

0 item(s) - Kr0,-. Your shopping cart is empty! Welcome visitor you can login. Or create an account. Siemens MS41 for M52B28 with m50b25 intake. Siemens MS42 M52TUB23/M52TUB28 e38/e39/e46/z3. Siemens MSS52 S62B50 e39 m5 Alpha-N. Siemens MSS54 S54B32 e46 m3. Bosch 0261200413 M50B25 Vanos E36/E34 325/525. Bosch 0261203667 M44B19 E36 318is/318ti. Bosch 0281010314 DDE4 M57D25/M57D30. Bosch 0261204420 M43TUB19 e46 316 318. Siemens MS41 Flash Tool. Siemens MSS5x Flash Tool.

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Chipster.nu - Chip och implant parties - Get upgraded

Nytt chip-event i Stockholm. Klicka här. De flesta av oss har sedan länge tröttnat på att bära med oss nycklar och kort. Med chippet öppnas möjligheten att ersätta dessa med en enda lösning. Även företagen börjar få upp ögonen för tekniken. Chippet kan redan idag användas på till exempel SATS. Bra stöd finns även i passersystemen i kontorskomplex och bostadshus. Andra företag som använder tekniken är SAS och SL. Vill du veta mer rekommenderar vi att du läser FAQn. Planerar företaget att göra något extra ...