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COXPRESS.NET

Welcome to CoXpress

CoXpress is a pilot database of gene co-expression, utilising publicly available microarray data from GEO. The pilot database currently includes gene co-expression values for Chicken (Gallus gallus) only. Data from 119 microarray experiments was used for this pilot. Probes/reporters are mapped to Ensembl. Gene identifiers using annotation from GEO and Ensembl BioMart. Researchers can use the CoXpress web service to download gene expression networks relating to a gene or Gene Ontology (GO).

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Institute for Animal Health

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UK

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Institute for Animal Health

Pirbrig●●●●●●●oratory

Pir●●●ght , Surrey, GU24 0NF

UK

1.441●●●●●32441
ad●●●●●●●●●●@iah.ac.uk

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Welcome to CoXpress | coxpress.net Reviews
<META>
DESCRIPTION
CoXpress is a pilot database of gene co-expression, utilising publicly available microarray data from GEO. The pilot database currently includes gene co-expression values for Chicken (Gallus gallus) only. Data from 119 microarray experiments was used for this pilot. Probes/reporters are mapped to Ensembl. Gene identifiers using annotation from GEO and Ensembl BioMart. Researchers can use the CoXpress web service to download gene expression networks relating to a gene or Gene Ontology (GO).
<META>
KEYWORDS
1 welcome to coxpress
2 navigation
3 ensembl genes
4 network
5 gene ontology
6 or biolayout
7 or go accession
8 or go network
9 export form
10 coupons
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welcome to coxpress,navigation,ensembl genes,network,gene ontology,or biolayout,or go accession,or go network,export form
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Welcome to CoXpress | coxpress.net Reviews

https://coxpress.net

CoXpress is a pilot database of gene co-expression, utilising publicly available microarray data from GEO. The pilot database currently includes gene co-expression values for Chicken (Gallus gallus) only. Data from 119 microarray experiments was used for this pilot. Probes/reporters are mapped to Ensembl. Gene identifiers using annotation from GEO and Ensembl BioMart. Researchers can use the CoXpress web service to download gene expression networks relating to a gene or Gene Ontology (GO).

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1

Search Ensembl Genes

http://www.coxpress.net/ensembl

Find Ensembl Genes by text search. You may search for Ensembl Genes by any of the following fields:. GgaAffx.1523.1.S1 s at. RefSeq Predicted Protein ID. Searches for partial terms are allowed, but results are limited to the first fifty genes.

2

Enter Ensembl ID for Network Export

http://www.coxpress.net/ensembl/network

Enter Ensembl ID for Network Export. Choose parameters for export. XGMML (eXtensible Graph Markup and Modeling Language). SIF (Cytoscape Simple Interaction Format). BioLayout (Launch using Java Web Start). BioLayout (Weighted Pairwise With Edge Annotation). Ensembl accessions should be of the form ENSXXXXNNNNNNNNNNN. Example: ENSGALG00000013265. Correlation cutoff: minimum pearsons correlation for connections between genes in the network.

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Last update: 2012.08.29. Entrez Gene ID (1717). Coexpression data are updated with new 4 species. [ History. Example: [ gene page. Example: [ gene page. Example: [ gene page. Example: [ gene list. Example: [ gene list. Example: [ gene list. Example: [ gene list. Example: [ gene list. Example: [ gene list. Example: [ gene list. Example: [ gene list. COXPRESdb system has recovered. COXPRESdb will be shutdown for 1 hours. During that time, please use the mirror server [ Link.

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COXPRESdb: Home

Last update: 2014.08.19. Entrez Gene ID (1717). Coexpression data of 9 species are updated. [ History. RNAseq-based coexpression data are available for human (Hsa3), mouse (Mmu2) and fly (Dme2). [ History. Coexpression data are updated with new 4 species. [ History. Okamura et al. (2015) COXPRESdb in 2015: coexpression database for animal species by DNA-microarray and RNAseq-based expression data with multiple quality assessment systems. Nucleic Acids Res. Raquo; Tutorial Movie. Example: [ gene page.

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coxpress.net coxpress.net

Welcome to CoXpress

CoXpress is a pilot database of gene co-expression, utilising publicly available microarray data from GEO. The pilot database currently includes gene co-expression values for Chicken (Gallus gallus) only. Data from 119 microarray experiments was used for this pilot. Probes/reporters are mapped to Ensembl. Gene identifiers using annotation from GEO and Ensembl BioMart. Researchers can use the CoXpress web service to download gene expression networks relating to a gene or Gene Ontology (GO).

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