Protein Feature Dot Plot. Welcome to the home of the Deep Metazoan Phylogeny Project! The aim of the Priority Programme " Phylogeny of Animals - Deep Metazoan Phylogeny. Additional information about this Priority Program (SPP 1174) is available at the website of the "Deutsche Foschungsgemeinschaft".
http://www.deep-phylogeny.org/
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CIBIV MFPL GmbH
Ingo Ebersberger
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Deep Metazoan Phylogeny | deep-phylogeny.org Reviews
https://deep-phylogeny.org
Protein Feature Dot Plot. Welcome to the home of the Deep Metazoan Phylogeny Project! The aim of the Priority Programme " Phylogeny of Animals - Deep Metazoan Phylogeny. Additional information about this Priority Program (SPP 1174) is available at the website of the "Deutsche Foschungsgemeinschaft".
deep-phylogeny.org
Deep Metazoan Phylogeny
http://www.deep-phylogeny.org/index.html
Protein Feature Dot Plot. Welcome to the home of the Deep Metazoan Phylogeny Project! The aim of the Priority Programme " Phylogeny of Animals - Deep Metazoan Phylogeny. Additional information about this Priority Program (SPP 1174) is available at the website of the "Deutsche Foschungsgemeinschaft".
DMP - Imprint
http://www.deep-phylogeny.org/imprint.html
Max F Perutz Laboratories GmbH (MFPL). Dr Bohr Gasse 9.
DMP - Publications
http://www.deep-phylogeny.org/cgi-bin/publ.html
Publications within the SPP 1174. Bernhard Hausdorf, Martin Helmkampf, Achim Meyer, Alexander Witek, Holger Herlyn, Iris Bruchhaus, Thomas Hankeln,Torsten H. Struck and Bernhard Lieb. Spiralian phylogenomics supports the resurrection of Bryozoa comprising Ectoprocta and Entoprocta", Molecular Biology and Evolution,. Ebersberger, I., Gube, M. Strauss, S. Kupczok, A., Eckart, M., Voigt, K., Kothe, E., and von Haeseler, A. A stable backbone for the fungi", submitted,. Harzsch S, Wanninger A. Pick KS, Philip...
DMP - Member Site
http://www.deep-phylogeny.org/member.html
Https:/ www.deep-phylogeny.org. To get access to our member site. Get Login / Forgotten Password. Please send an email to DBDMP. To get your Username / Password combination.
Hidden Markov Model Based Ortholog Search Tool Using Reciprocity
http://www.deep-phylogeny.org/hamstr
Earch for Or t. Welcome to the HaMSTR-WebApplication Project! HaMSTR is a Hidden Markov Model based search tool to screen EST sequence data for the presence of putative orthologs to a pre-defined set of genes. A-priori knowledge about orthology-relationships among genes in different sets of reference species is extracted from the Inparanoid-Database. Ortholog groups of genes are then formed from the pairwise Inparanoid ortholog assignments applying the criterion of transitive closure.
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Insect Phylogenomics: Exploring the Source of Incongruence Using New Transcriptomic Data
http://gbe.oxfordjournals.org/content/4/12/1295.long
Genome Biology and Evolution. View Current Issue (Volume 8 Issue 8 August 2016). Genome Biology and Evolution. Insect Phylogenomics: Exploring the Source of Incongruence Using New Transcriptomic Data. ITZ, Ecology and Evolution, Stiftung Tieraerztliche Hochschule Hannover, Hannover, Germany. Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York. Division of Invertebrate Zoology, American Museum of Natural History, New York, New York. November 15, 2012. Despite...
Mollusca Archives - ZSM Collection Blog
http://zsmblog.de/category/mollusca
News from the Zoologische Staatssammlung München. Ringipleura unsere neueste Meeresnacktschnecken-Revolution. Wer hätte geahnt, dass dick beschalte Ringiculidae die nächsten Verwandten der oft hübsch bunten Meeres-Nacktschnecken (Nudipleura) sind? Ganz ehrlich, wir auch nicht. Doch molekulare Stammbäume und auch mikroanatomische Befunde lassen kaum Zweifel: Siehe www.nature.com/articles/srep30908. Wie sah sie aus? Michael Schrödl, ZSM, Mollusca. This entry was posted in Mollusca. Im Bereich Mollusca ist ...
Services and Databases at CIBIV
http://www.cibiv.at/services
Center for Integrative Bioinformatics Vienna. Max F Perutz Laboratories. Dr Bohr Gasse 9. A-1030 Vienna, Austria. Max F Perutz Laboratories. Medical University, Vienna. Services and Databases Maintained at CIBIV. A Feature Architecture Comparison Tool to search for functionally equivalent proteins. FACT is accessible at www.cibiv.at/FACT. HaMSTR is a Hidden Markov Model based search tool to screen EST sequence data for the presence of putative orthologs to a pre-defined set of genes.
Software from the CIBIV
http://www.cibiv.at/software
Center for Integrative Bioinformatics Vienna. Max F Perutz Laboratories. Dr Bohr Gasse 9. A-1030 Vienna, Austria. Max F Perutz Laboratories. Medical University, Vienna. Software developed at the Department. Performs statistical multiple alignment and phylogeny reconstruction simultaneously. The package is available at the ALIFRITZ homepage. Bisulfite Sequencing Scrorer (BISS). Is an analysis pipeline for the deep sequencing data after bisulfite conversion (BS-Seq). DAGwoman - DAG-based WOrkflow MANager.
Publications, CIBIV
http://www.cibiv.at/publications
Center for Integrative Bioinformatics Vienna. Max F Perutz Laboratories. Dr Bohr Gasse 9. A-1030 Vienna, Austria. Max F Perutz Laboratories. Medical University, Vienna. And BQ. Minh. 2016) Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices. 65, in press. ( free reprint. And A von Haeseler. 2016) An Enumerative Combinatorics Model for Fragmentation Patterns in RNA Sequencing Provides Insights into Non-uniformity of the Expected Fragment Starting Point and Coverage Profile. 2016) Do...
Arndt von Haeseler
http://www.cibiv.at/~haeseler
Center for Integrative Bioinformatics Vienna. Max F Perutz Laboratories. Dr Bohr Gasse 9. A-1030 Vienna, Austria. Max F Perutz Laboratories. Medical University, Vienna. Center for Integrative Bioinformatics Vienna (CIBIV). CIBIV is a joint institute of Vienna University. Max F Perutz Laboratories (MFPL). Campus Vienna Biocenter 5 (VBC5), Ebene 1. A-1030 Wien, Austria. Phone: 43 1 / 4277 - 74307. Email: arndt.von.haeseler(AT)univie.ac.at. Center for Integrative Bioinformatics Vienna (CIBIV). 2002 - Aug 20...
gobics.de: Funding
http://gobics.de/department/funding
University of Göttingen. Faculty of Biology and Psychology. Institute of Microbiology and Genetics. Financial support comes from:. DFG Project MO 1048/1-1 Objective functions and optimization techniques for the segment-based sequence alignment. By B Morgenstern and S. Waack. Within DFG Priority Program SPP 1063. DFG Project MO 1048/7-3 A combined phylogenetic and palaeontological approach to resolve deep phylogenetic incongruences among Phylum Porifera. By G Wörheide. B Morgenstern, J. Reitner. DFG Proje...
Group Members, CIBIV - Center for Integrative Bioinformatics Vienna
http://www.cibiv.at/people
Center for Integrative Bioinformatics Vienna. Max F Perutz Laboratories. Dr Bohr Gasse 9. A-1030 Vienna, Austria. Max F Perutz Laboratories. Medical University, Vienna. Phone extensions are about to change! Currently both do work. Benchtop sequencing on benchtop computers. Molecular Phylogeny and Taxonomy of the Physarum notabile Species Complex (Myxomycetes). PhD Student and Post-Doc. Domains, Proteins, and Evolution. Bioinformatic tools for analyzing epigenomic profiling data. Nguyen Thi Minh Anh.
Bioinformatics Teaching
http://www.cibiv.at/teaching
Center for Integrative Bioinformatics Vienna. Max F Perutz Laboratories. Dr Bohr Gasse 9. A-1030 Vienna, Austria. Max F Perutz Laboratories. Medical University, Vienna. Informatik Ausprägungsfach Bioinformatik (Bachelor). VO Einführung in die Bioinformatik - Ausprägungsfach Bioinformatik für WS 2015/16 (Ringvorlesung). ABI Angewandte Bioinformatik (050062 VU, WS2015/16). GBI Grundlagen der Bioinformatik (050076 VU, WS2016/2017). Praktikum Bioinformatik mit Bachelorarbeit (50058 PR). Einführung in die Bio...
Contact to CIBIV - Center for Integrative Bioinformatics Vienna
http://www.cibiv.at/impressum
Center for Integrative Bioinformatics Vienna. Max F Perutz Laboratories. Dr Bohr Gasse 9. A-1030 Vienna, Austria. Max F Perutz Laboratories. Medical University, Vienna. Max F Perutz Laboratories GmbH (MFPL). Dr Bohr Gasse 9.
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Deep Metazoan Phylogeny
Protein Feature Dot Plot. Welcome to the home of the Deep Metazoan Phylogeny Project! The aim of the Priority Programme " Phylogeny of Animals - Deep Metazoan Phylogeny. Additional information about this Priority Program (SPP 1174) is available at the website of the "Deutsche Foschungsgemeinschaft".
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