drmotifs.genouest.org

Dr Motifs – Blog

Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Protomata 2 now available. Today, I’m going to write about a software which is developed here at the Irisa/INRIA center (Rennes, France), in the Symbiose team: Protomata. Protomata allows to perform pattern matching and discovery on protein sequences. In fact, Protomata is made out of 2 main components: Protomata-learner for discovery and Protomatch for matching. The thing to keep in mind when you use Protomata is that, fro...

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Dr Motifs – Blog | drmotifs.genouest.org Reviews

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Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Protomata 2 now available. Today, I’m going to write about a software which is developed here at the Irisa/INRIA center (Rennes, France), in the Symbiose team: Protomata. Protomata allows to perform pattern matching and discovery on protein sequences. In fact, Protomata is made out of 2 main components: Protomata-learner for discovery and Protomatch for matching. The thing to keep in mind when you use Protomata is that, fro...

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Dr Motifs – Blog | drmotifs.genouest.org Reviews

https://drmotifs.genouest.org

Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Protomata 2 now available. Today, I’m going to write about a software which is developed here at the Irisa/INRIA center (Rennes, France), in the Symbiose team: Protomata. Protomata allows to perform pattern matching and discovery on protein sequences. In fact, Protomata is made out of 2 main components: Protomata-learner for discovery and Protomatch for matching. The thing to keep in mind when you use Protomata is that, fro...

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drmotifs.genouest.org

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2011 December | Dr Motifs – Blog

http://drmotifs.genouest.org/2011/12

Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Archive for December, 2011. MEME 4.7.0 update on. December 6, 2011. Dr Motifs is a project from the GenOuest Bioinformatics Platform (Rennes, France) dedicated to pattern matching and discovery in biological data like nucleic or proteic sequences. The aim of the project is to create an integrated platform for motifs study, using popular software and more advanced tools developed by the Symbiose INRIA team.

2

2012 February | Dr Motifs – Blog

http://drmotifs.genouest.org/2012/02

Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Archive for February, 2012. MEME update: 4.8.1 on. February 21, 2012. Dr Motifs is a project from the GenOuest Bioinformatics Platform (Rennes, France) dedicated to pattern matching and discovery in biological data like nucleic or proteic sequences. The aim of the project is to create an integrated platform for motifs study, using popular software and more advanced tools developed by the Symbiose INRIA team.

3

MEME update: 4.8.1 | Dr Motifs – Blog

http://drmotifs.genouest.org/2012/02/meme-update-4-8-1

Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. MEME update: 4.8.1. By A Bretaudeau on February 21, 2012. I just updated our MEME server. To the latest version (4.8.1). This new version comes with a new tool available on the web interface: CentriMo. It is dedicated to the analysis of ChIP-Seq data. From → Tools. Click here to cancel reply. XHTML is allowed. Your email address will never. Subscribe to this comment feed via RSS. By The Theme Foundry.

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MEME 4.7.0 update | Dr Motifs – Blog

http://drmotifs.genouest.org/2011/12/meme-4-7-0-update

Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. MEME 4.7.0 update. By A Bretaudeau on December 6, 2011. I just updated our MEME server to the latest version: 4.7.0. As usual, the web interface is available at the same address: http:/ tools.genouest.org/tools/meme/. The main change in this version is the new DREME web service and web interface. Which is online now. Have a look at the release notes. To see the whole changelog. That’s all for today! From → Tools.

5

DELTA-BLAST | Dr Motifs – Blog

http://drmotifs.genouest.org/2012/05/delta-blast

Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. By A Bretaudeau on May 31, 2012. A new Blast version (2.2.26 ) has been released by the NCBI a few weeks ago. You can now use it using our blast web interface. Or directly on our cluster. I have also updated the Symfony bundle ( GenouestBlastBundle. To work with this new version, so if you are using it and willing to update to this new blast version, don’t forget to update the code. As usual, the blast changelog. The result...

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drmotifs.genouest.org

Dr Motifs – Blog

Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Protomata 2 now available. Today, I’m going to write about a software which is developed here at the Irisa/INRIA center (Rennes, France), in the Symbiose team: Protomata. Protomata allows to perform pattern matching and discovery on protein sequences. In fact, Protomata is made out of 2 main components: Protomata-learner for discovery and Protomatch for matching. The thing to keep in mind when you use Protomata is that, fro...

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Pattern matching and discovery in bioinformatics. Learn more about Dr Motifs. Protomata 2 now available. MEME update: 4.8.1. MEME 4.7.0 update. Blast web interface: source code available. Searching for common patterns in sets of sequences. Looking for motifs occurences in sequences. Predicting gene or protein functions. This website aims to be a central place to find informations about motifs analysis in bioinformatics data. Have a look at the tools available on our platform.

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