drmotifs.genouest.org
About | Dr Motifs – Blog
http://drmotifs.genouest.org/about
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Dr Motifs is a bioinformatics project launched by the GenOuest bioinformatics platform. Rennes, France) in March 2010. This project, led by Olivier Collin, is funded by IBiSA. And is conducted by Anthony Bretaudeau who is a developer on this platform. The aim of this project is to provide a complete platform for the study of motifs in biological data like nucleic or proteic sequences. Click here to cancel reply. Dr Motifs i...
drmotifs.genouest.org
MEME 4.6: MEME-ChIP and Spamo | Dr Motifs – Blog
http://drmotifs.genouest.org/2011/02/meme-4-6-meme-chip-and-spamo
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. MEME 4.6: MEME-ChIP and Spamo. By A Bretaudeau on February 3, 2011. As promised in one of my last post. I’ve just finished updating our MEME server. To the fresh version 4.6.0. The main new features of this release is the addition of two new applications in the suite: MEME-ChIP and Spamo. As you may guess, MEME-ChIP is dedicated to… ChIP-Seq experiments! Explaining how it works. Spamo is also a tool particularly useful for ...
drmotifs.genouest.org
2012 June | Dr Motifs – Blog
http://drmotifs.genouest.org/2012/06
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Archive for June, 2012. Protomata 2 now available on. June 15, 2012. Dr Motifs is a project from the GenOuest Bioinformatics Platform (Rennes, France) dedicated to pattern matching and discovery in biological data like nucleic or proteic sequences. The aim of the project is to create an integrated platform for motifs study, using popular software and more advanced tools developed by the Symbiose INRIA team.
drmotifs.genouest.org
New website! | Dr Motifs – Blog
http://drmotifs.genouest.org/2010/12/new-website
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. By A Bretaudeau on December 15, 2010. Today we’re launching a new website! It’s available at www.drmotifs.org. And it’s the new face of Dr Motifs. The new Dr Motifs website. The aim of this new website is to have a new entry point to Dr Motifs,with more stable information and (we hope! One page I’d like to point you to is the tools page. Of course, this blog will continue to live! In fact the website. The aim of the project...
drmotifs.genouest.org
Blast+ and MEME updates | Dr Motifs – Blog
http://drmotifs.genouest.org/2011/04/blast-and-meme-updates
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Blast and MEME updates. By A Bretaudeau on April 5, 2011. Just a quick post to tell you that I have updated our servers to the latest Blast and MEME versions. Blast 2.2.25. So this new version fixes this specific bug (and others), and brings some improvements which you can see in the changelog. Feel free to test our blast form. And tell us if you have any problem with it. MEME 4.6.1. As usual reading the release notes.
drmotifs.genouest.org
How-tos | Dr Motifs – Blog
http://drmotifs.genouest.org/category/how-tos
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Posts from the ‘How-tos’ Category. January 28, 2011. October 15, 2010. How to use InterProScan on. April 27, 2010. Dr Motifs is a project from the GenOuest Bioinformatics Platform (Rennes, France) dedicated to pattern matching and discovery in biological data like nucleic or proteic sequences. By The Theme Foundry.
drmotifs.genouest.org
Dr Motifs – Blog
http://drmotifs.genouest.org/page/2
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. New versions: MEME and InterProScan. Just a few words to keep you informed about the progress of the Dr Motifs project. InterProScan 4.7 has been released a few days ago. We have installed this new version on our cluster. The main new feature is that now it uses hmmer 3 for Gene3D and Pfam databanks. This means faster and better results hopefully! Our web form is still available at iprscan.genouest.org. Installing new tools;.
drmotifs.genouest.org
Protomata 2 now available | Dr Motifs – Blog
http://drmotifs.genouest.org/2012/06/protomata-2-now-available
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Protomata 2 now available. By A Bretaudeau on June 15, 2012. Today, I’m going to write about a software which is developed here at the Irisa/INRIA center (Rennes, France), in the Symbiose team: Protomata. Protomata allows to perform pattern matching and discovery on protein sequences. In fact, Protomata is made out of 2 main components: Protomata-learner for discovery and Protomatch for matching. The thing to keep in mind w...
drmotifs.genouest.org
Dr Motifs project | Dr Motifs – Blog
http://drmotifs.genouest.org/category/project
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Posts from the ‘Dr Motifs project’ Category. Blast web interface: source code available on. September 14, 2011. December 15, 2010. New versions: MEME and InterProScan on. November 17, 2010. The technical architecture on. August 13, 2010. Announcing the Dr Motifs project on. April 14, 2010. By The Theme Foundry.
drmotifs.genouest.org
2012 May | Dr Motifs – Blog
http://drmotifs.genouest.org/2012/05
Pattern matching and discovery in bioinformatics. Back to the Dr Motifs Homepage. Archive for May, 2012. May 31, 2012. Dr Motifs is a project from the GenOuest Bioinformatics Platform (Rennes, France) dedicated to pattern matching and discovery in biological data like nucleic or proteic sequences. The aim of the project is to create an integrated platform for motifs study, using popular software and more advanced tools developed by the Symbiose INRIA team. By The Theme Foundry.
