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Computational Genomics @ PRBBStarting point for all the computational genomics groups and research in the PRBB
http://genome.prbb.cat/
Starting point for all the computational genomics groups and research in the PRBB
http://genome.prbb.cat/
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Computational Genomics @ PRBB | genome.prbb.cat Reviews
https://genome.prbb.cat
Starting point for all the computational genomics groups and research in the PRBB
compmerge | Bioinformatics and Genomics @ CRG
http://big.crg.cat/services/compmerge
Computational Biology of RNA Processing. Posted Tue, 2012-03-20 16:18 by Sarah Djebali. Compmerge is a program that tries to solve the same problem as cuffmerge.It is not limited to cufflinks models and transcripts, but can work with any .gtf file.It merges the spliced transcripts that have a compatible intron structure and merges the monoexonic transcripts based on simple stranded overlap.The output is a .gtf file of merged transcripts. After getting the compmerge executable, type:.
meta | Bioinformatics and Genomics @ CRG
http://big.crg.cat/services/meta
Computational Biology of RNA Processing. Posted Fri, 2009-09-04 17:50 by Toni Hermoso. Meta is a program to produce and to align the TF-maps of two gene promoter regions. meta is very useful to characterize promoter regions from orthologous genes, or from co-regulated genes in microarrays, as it reduces the signal/noise ratio in a very significant manner, still detecting the real functional sites.
gff2aplot | Bioinformatics and Genomics @ CRG
http://big.crg.cat/services/gff2aplot
Computational Biology of RNA Processing. Posted Fri, 2009-09-04 17:49 by Toni Hermoso. Visualizing pair-wise alignments with annotated axes from GFF files. We are proud to announce the new version of. That has been re-implemented in perl. Visit the program's web page downloading section to obtain v2.0. You can obtain the full distribution tarball from there. We hope you will enjoy them. A snapshots web page is also available. Listing few examples of what can be done with.
Gene Function and Evolution | Bioinformatics and Genomics @ CRG
http://big.crg.cat/gene_function_and_evolution
A link with Cambridge. Predictor of Interactions with Molecular Chaperones. Predictor of Protein Amyloidogenicity. Predictor of Protein Folding Propensities. Predictor of protein-RNA interactions. Predictor of Soluble Expression. Principles of self-organization in biological pathways: a hypothesis on the autogenous association of alpha-synuclein. CatRAPID omics: a web server for large-scale prediction of protein-RNA interactions. Neurodegeneration as an RNA disorder. Gene Function and Evolution. I am cur...
Events | Bioinformatics and Genomics @ CRG
http://big.crg.cat/events
Gene function and evolution. Genetic causes of disease. Events where Bioinformatics @ CRG is involved, either hosting them or participating in. You can also browse the events through the calendar. Andrea- Status Update Group Meeting. Wed, 2010-06-30 09:30. Rory- Status Update Group Meeting. Wed, 2010-06-23 09:30. Analysis and manipulation of phylogenomic data using ETE. Wed, 2010-06-23 09:00. Fri, 2010-06-25 19:53. Joao Curado - Status Update Group Meeting. Wed, 2010-06-09 09:30. Wed, 2010-05-26 09:30.
mmeta | Bioinformatics and Genomics @ CRG
http://big.crg.cat/services/mmeta
Computational Biology of RNA Processing. Posted Fri, 2009-09-04 17:51 by Toni Hermoso. Mmeta is a program to produce and to align the TF-maps of multiple promoter regions. mmeta is very powerful to characterize promoter regions from multiple orthologous genes, or from co-regulated genes in microarrays, as it reduces the signal/noise ratio in a very significant manner, still detecting the real functional sites.
Comparative Bioinformatics | Bioinformatics and Genomics @ CRG
http://big.crg.cat/comparative_bioinformatics
MotEvo: integrated Bayesian probabilistic methods for inferring regulatory sites and motifs on multiple alignments of DNA sequences. AMPA: an automated web server for prediction of protein antimicrobial regions. Use of ChIP-Seq data for the design of a multiple promoter-alignment method. Accurate multiple sequence alignment of transmembrane proteins with PSI-Coffee. Transcription Factor Binding Site Positioning in Yeast: Proximal Promoter Motifs Characterize TATA-Less Promoters.
AStalavista | Bioinformatics and Genomics @ CRG
http://big.crg.cat/services/astalavista
Computational Biology of RNA Processing. Posted Fri, 2009-09-04 17:41 by Toni Hermoso. Retrieves all alternative splicing events from generic transcript annotations.
AcE | Bioinformatics and Genomics @ CRG
http://big.crg.cat/services/ace
Computational Biology of RNA Processing. Posted Fri, 2009-09-04 17:44 by Toni Hermoso. Our version is no longer maintained, from now on you can get the latest AcE version at Bioinformatics.org. You can contact with William.S.Hayes.
Predictor of protein-RNA interactions | Bioinformatics and Genomics @ CRG
http://big.crg.cat/gene_function_and_evolution/services/catrapid
A link with Cambridge. Gene Function and Evolution. Predictor of protein-RNA interactions. Posted Fri, 2010-11-12 15:38 by Gian Gaetano Tartaglia. Fast predictions of RNA-Protein interactions and domains. Should be pasted in the ' Protein sequence. And ' RNA sequence. The catRAPID server accepts only amino acid and nucleic acid sequences, defined as lines of sequence data, without the FASTA definition line, sequence identifiers and/or other symbols; eg:. Are reported here below:. 1 Use one word.
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Center for Functional Genomics
Northwestern University Research Centers. The Center for Functional Genomics has as its mission to unify basic research efforts at Northwestern University focused on understanding gene function. Research within the Center has the following goals:. To use phenotype-driven, forward genetic approaches to identify genetic pathways to understand gene function. To use functional, expression-driven approaches to elucidate gene function. Developing and Distributing New Mouse Models for Neuroscience Research.
Home - Genome.One
Whole Genome Sequencing Tests. About Whole Genome Sequencing. Pioneered by the Garvan Institute. Are you a patient? To go to the patient website. Genome.One provides clinical Whole Genome Sequencing to answer life’s biggest health questions enhancing the lives of patients, families and communities across the world. Backed by the pioneering excellence of the Garvan Institute of Medical Research, we make genomic break-throughs accessible to all, for the benefit of all. How do we do it. How do we do it.
The University of Oklahoma's Advanced Center for Genome Technology
The University of Oklahoma's. Advanced Center for Genome Technology. It has been a great run, but as of December 1, 2014, OU's Advanced Center for Genome Technology (SCTG) has closed it's doors. Our federal funding has ended, the last person in my laboratory found a position elsewhere, our equipment, and all our supplies and reagents have either been sold, given to other labs in Chem/Biochem or other labs at OU, or otherwise appropriately disposed of. For a bit of history. Through his our career, Profess...
Genome: The Secret of How Life Works - Home
The future is here! Scientists have mapped the human genome - your complete set of genes. Genes are the secret codes, or recipes that make us who we are and that influence who we might become. Your genome is like an enormous recipe book and with its decoding come new possibilities. Experience this amazing world, first-hand, in. GENOME: The Secret of How Life Works. Sitio en Español. Have you ever wondered. What you have in common with a Fruit Fly? What your children might look like?
UCSC Genome Browser Home
About the UCSC Genome Bioinformatics Site. Welcome to the UCSC Genome Browser website. This site contains the reference sequence and working draft assemblies for a large collection of genomes. It also provides portals to ENCODE. Data at UCSC (2003 to 2012) and to the Neandertal. Project. Download or purchase the Genome Browser source code, or the Genome Browser in a Box ( GBiB. At our online store. We encourage you to explore these sequences with our tools. The Genome Browser. The Genome Browser project ...
Computational Genomics @ PRBB
Computational Genomics @ PRBB. Maralba - at - upf.edu. Evolutionary Genomics, IMIM. Research in our group focuses on the use of comparative genomics and large-scale data analysis to gain an understanding on the evolution of genes and genomes and to predict functional elements. We have a strong computational focus but collaborate with experimental groups in some of our projects. Robert.castelo - at - upf.edu. Functional Genomics, UPF. Eduardo.eyras - at - upf.edu. Regulatory Genomics, UPF. The main resear...
Computational Genomics @ PRBB
Computational Genomics @ PRBB. Maralba - at - upf.edu. Evolutionary Genomics, IMIM. Research in our group focuses on the use of comparative genomics and large-scale data analysis to gain an understanding on the evolution of genes and genomes and to predict functional elements. We have a strong computational focus but collaborate with experimental groups in some of our projects. Robert.castelo - at - upf.edu. Functional Genomics, UPF. Eduardo.eyras - at - upf.edu. Regulatory Genomics, UPF. The main resear...
Genome Science Division | RCAST – The University of Tokyo
RCAST – The University of Tokyo. Ryo Nakaki Won the Best Poster Award. Sunday May 24th, 2015 ニュース). Ryo Nakaki (postdoctoral fellow) won the best poster award at 11th AGW (The 11th International Workshop on Advanced Genomics, held May 20-22). Wednesday December 31st, 2014 研究室の様子). Cheers for our hard work this year! Friday July 25th, 2014 研究室の様子). Exome sequencing identified frequent gain-of-function mutations of RHOA in Diffuse-type Gastric Carcinoma. Monday May 12th, 2014 ニュース). 10th LSBM Annual Meeting.
Biological Research
Southeast Fungal Biology Group. Walt W. Lilly. Allen C. Gathman. Search Walt's Reprint Files. Genome (13 chromosomes) - protected tracks. Publications from our Lab. Distinguished alumni from our Lab.
НОЦ «Центр геномных исследований» СФУ
Семинар ушел на летние каникулы! Чего и вам желаем :). До встречи в сентябре! 30-31 июля на базе Поволжского государственного технологического университета состоялся российско-германский симпозиум по вопросам лесной генетики, лесовосстановления, лесоводства и изменения климата. Наши ребята приняли участие в работе Летней школы по биоинформатике. 20-25 июля 2015 года в Московском государственном университете прошла Третья летняя школа по биоинформатике. У нас были гости! 5 июня 2015 г. у нас в гостях ...
Academia Sinica Plant Genome Center
160; Functional Genomics. 160; . 160; . 160; Our Collaborators. 160; . 160; . How to reach us. 160; . 160; . 160; . 160; . 160; . 160; . 160; . 160; Workshop Documents. 160; TRIM Database. 160; Academia Sinica. 160; Feedback to us. ASPGC has submitted t. Otal number of BACs/PACs in Genbank:. 29,916,617 (coverage 99.1%). The map-based sequence of the rice genome.
