gtexportal.org gtexportal.org

gtexportal.org

GTEx Portal

Portal for the Genotype-Tissue Expression (GTEx) project. Gene expression and quantitative trait loci from 53 human tissues. Visualization and download of all public data generated by the GTEx project.

http://www.gtexportal.org/

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ho●●●●●●●●@broadinstitute.org

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GTEx Portal | gtexportal.org Reviews
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Portal for the Genotype-Tissue Expression (GTEx) project. Gene expression and quantitative trait loci from 53 human tissues. Visualization and download of all public data generated by the GTEx project.
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1 GTEx
2 eQTL
3 transcriptome
4 gene expression
5 human
6 multi-tissue
7 human transcriptome
8 quantitative trait loci
9 genetic association
10 isoform expression
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toggle navigation,gtex,datasets,summary statistics,download,expression,search gene/isoform expr,top expressed genes,multi gene query,expression pca,qtls and browsers,single tissue eqtls,gene eqtl visualizer,igv eqtl browser,multi tissue eqtls,splice qtls
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GTEx Portal | gtexportal.org Reviews

https://gtexportal.org

Portal for the Genotype-Tissue Expression (GTEx) project. Gene expression and quantitative trait loci from 53 human tissues. Visualization and download of all public data generated by the GTEx project.

INTERNAL PAGES

gtexportal.org gtexportal.org
1

GTEx Portal

https://www.gtexportal.org/home/False

Protein Trunc. Variants. Latest Version: dbGaP Accession phs000424.v6.p1. Dataset Summary Statistics Report. Browse eQTL Tissues An eQTL tissue is one with more than 70 samples with matched gene expression and genotype data. N 70 was chosen as a lower bound for calculating eQTLs to ensure a sufficient amount of statistical power for cis. More details about the tissues can be found on the Summary Statistics page. Total samples in all eQTL tissues:. Test Your Own eQTLs. Analysis Results in Older Releases.

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commonfund.nih.gov commonfund.nih.gov

Genotype-Tissue Expression (GTEx)

http://commonfund.nih.gov/GTEx

US Department of Health and Human Services. National Institutes of Health. Division of Program Coordination, Planning, and Strategic Initiatives (DPCPSI). On Fri, 06/28/2013 - 05:57. The Common Fund's Genotype-Tissue Expression (GTEx). The GTEx project includes the following initiatives:. Online data resource ( GTEx Portal. For storing, cataloging, searching, and sharing aggregated level data. Novel Statistical Methods for Human Gene Expression Quantitative Trait Loci (eQTL) Analysis. GTEx dataset helps ...

tllab.org tllab.org

Blog | Lappalainen Lab | Functional Genomics @ NYGC

https://tllab.org/blog

Functional Genomics @ NYGC. The sound of a gene breaking. May 18, 2015. Equal contribution; corresponding authors. If you listened to your cells very carefully, would you be able to hear when a gene breaks? In a new paper in Science, we show that this is, in a way, possible: by analysis of huge RNA-sequencing data sets, we can detect cellular effects of protein-truncating variants in the genome. Trending: rare variants in human disease. In 2013, and the new GTEx project. Getting rid of the nonsense.

t2d-genetics-portal.blogspot.com t2d-genetics-portal.blogspot.com

Type 2 Diabetes Knowledge Portal News: October 2015

http://t2d-genetics-portal.blogspot.com/2015_10_01_archive.html

Wednesday, October 7, 2015. Type 2 Diabetes knowledge portal goes live. What if anyone could? Making that kind of sharing possible is the ultimate goal of a user-friendly web portal and knowledgebase launched October 7 at a special session. Of the American Society of Human Genetics annual meeting, by an international team that hopes to dramatically expand the number of researchers who can use human genetic data to study type 2 diabetes (T2D). 8220;Through AMP, we have an unprecedented opportunity to adva...

nextbio.com nextbio.com

Illumina FAQ

http://www.nextbio.com/b/corp/faq.nb

How do I query an app? Correlation Engine applications ("apps") can be accessed from the top of every page within Correlation Engine. This area, called the app menu, allows you to query any app whenever you need it. To query an app:. Go to the top of any page within Correlation Engine. Enter your term in the query field (under the app menu). Click the icon for the app you want to query. How do I query an app with a bioset? This process works a little differently. To query an app with a bioset:. Click the...

nextgenseek.com nextgenseek.com

Interesting papers from the GTEx (Genotype-Tissue Expression) Project

http://nextgenseek.com/2015/05/three-papers-from-the-gtex-genotype-tissue-expression-project

Making Sense of Next-Gen Sequencing Data. You are here: Home. Interesting papers from the GTEx (Genotype-Tissue Expression) Project. Interesting papers from the GTEx (Genotype-Tissue Expression) Project. May 8, 2015. Middot; Leave a Comment. It has been a good week for RNA-seq enthusiasts. First, Kallisto. A new way to quantify transcript expression, happened at BOG15. And this weeks’ Science magazine has three interesting papers on the GTEx (Genotype-Tissue Expression) Project. The human transcriptome a...

people.unil.ch people.unil.ch

Marc Robinson-Rechavi | MRR's blog in English

http://people.unil.ch/marcrobinsonrechavi

MRR's blog in English. How should abundant gene expression data be presented? Recently, it so happened that the example we had chosen to highlight our new Bgee gene page. Was also used as #Geneoftheweek. By Ensembl. And Ensembl tweeted the expression of this gene, hemoglobin β (HBB), in ArrayExpress:. In bone marrow and whole blood, of course! Ensembl (@ensembl) 11 mars 2016. As noted in a recent post on the blog of Bgee. Here is the presentation as it was in the old Bgee interface:. Here the choice is c...

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gtexportal.org gtexportal.org

GTEx Portal

Protein Trunc. Variants. How to cite or acknowledge the GTEx project? An example acknowledgment statement follows:. The Genotype-Tissue Expression (GTEx) Project was supported by the Common Fund. Of the Office of the Director of the National Institutes of Health, and by NCI, NHGRI, NHLBI, NIDA, NIMH, and NINDS. The data used for the analyses described in this manuscript were obtained from: [insert, where appropriate] the GTEx Portal. On MM/DD/YY and/or dbGaP. Accession number phs000424.vN.pN. When a SNP ...

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