fairdomhub.org
The FAIRDOMHub Data files
https://www.fairdomhub.org/data_files
Data files visible to you, out of a total of 1429. Liver microarray dataset for PCB 153. Systems toxicology of Atlantic cod. Created: 6th Feb 2017 at 10:25, Last updated: 10th Mar 2017 at 12:03. Kinetics on the move - Workshop 2016. Master template for hands on session. Created: 30th May 2016 at 11:44, Last updated: 3rd Mar 2017 at 14:13. Blasting bruteforce all Lepto sequences from Malte and peptides from Ansgar 20170302. Kinetics on the move - Workshop 2016. Created: 2nd Mar 2017 at 11:21. Protein, RNA...
fairdomhub.org
The FAIRDOMHub Events
https://www.fairdomhub.org/events
Events visible to you, out of a total of 65. Joint LiSyM and ERASysAPP Data Management PALs Meeting. 36088 Hünfeld bei Fulda. Created: 10th Mar 2017 at 12:19, Last updated: 10th Mar 2017 at 12:53. Annual Meeting 2017 in Basel. SysVirDrug Annual Meeting 2017 held at the ETH in Basel, Switzerland (hosted by Niko Beerenwinkel and Simon Dirmeier). Created: 7th Mar 2017 at 09:22. 4rd XyloCut Project Meeting. Created: 3rd Mar 2017 at 10:44. 3rd XyloCut Project Meeting. Created: 3rd Feb 2017 at 12:15. Data and ...
pipsa.h-its.org
PIPSA - compare electrostatic interaction properties
http://www.pipsa.h-its.org/pipsa/pipsa-conditions.jsp
License for use of the PIPSA webserver. This Agreement is governed by the law of the Federal Republic of Germany. The application of the UN Convention on the Sale of Goods is excluded. In any publication describing results from use of this webserver, cite the URL http:/ pipsa.h-its.org/ and the publications describing the method listed on the references. Webpage. Results from the PIPSA webserver that is used for publication need to cite this using the URL http:/ pipsa.h-its.org/. Address all corresponden...
pipsa.h-its.org
PIPSA - compare electrostatic interaction properties
http://www.pipsa.h-its.org/pipsa/manually.do
PIPSA analysis with input of protein structures in PDB or PQR format. Enter the file names of the coordinates of the proteins to be analyzed. The pdb files can be selected either from your local disk (left panel) or by entering pdb identifiers (e.g. 1hti 1dkw 1b9b 1ci1 1i45 1tim, right panel). The selected pdb files/entries will be shown in a list and can be removed if necessary. For further information about the algorithm. Select local PDB/PQR files. Specify PDB IDs from the RCSB. Files names will be cut.
pipsa.h-its.org
PIPSA - compare electrostatic interaction properties
http://www.pipsa.h-its.org/pipsa/pipsa-references.jsp
Protein Interaction Property Similarity Analysis). References describing the method (to cite when applying PIPSA). Blomberg N, Gabdoulline RR, Nilges M, and Wade RC. Classification of protein sequences by homology modeling and quantitative analysis of electrostatic similarity. Proteins: Str., Function and Genetics 1999, 37. 379-387. ( Abstract. First description of the PIPSA procedure. Wade RC, Gabdoulline RR and De Rienzo F. Protein Interaction Property Similarity Analysis. Detailed description of PIPSA.
pipsa.h-its.org
PIPSA - compare electrostatic interaction properties
http://www.pipsa.h-its.org/pipsa/version-history.jsp
This version history is for the parameter estimation module in sycamore ( http:/ sycamore.h-its.org. And for the webPIPSA ( http:/ pipsa.h-its.org. Sycamore is an integrated part of a system that provides you with a faciliated access to a number of tools and methods in system biology in order to build models of biochemical systems, view, analyse and refine them, as well as perform quick simulations. WebPIPSA is a standalone server, with an additional workflow to upload and analyze structures directly.
pipsa.h-its.org
PIPSA - compare electrostatic interaction properties
http://www.pipsa.h-its.org/pipsa/pipsa-index.jsp
This PIPSA service is provided for the comparison of the electrostatic interaction properties of proteins. It permits the classification of proteins according to their interaction properties. PIPSA may assist in function assignment, the estimation of binding properties and enzyme kinetic parameters. See References. PIPSA analysis (input PDB format coordinate files). PIPSA analysis (input SWISSPROT entries with EC annotation). Therefore this part is subject to the Modeller license conditions.
pipsa.h-its.org
PIPSA - compare electrostatic interaction properties
http://www.pipsa.h-its.org/pipsa/pipsa-docu.jsp
This document provides a documentation of webPIPSA. For a documentation of the stand-alone tool as well as additional information about the methods used in PIPSA please visit our tool usage page. A walkthrough demonstration can be found here. A PIPSA analysis allows the comparision of proteins with respect to their electrostatic properties. Currently two different entry points exist for starting an analysis using webPIPSA (the webserver implementation of PIPSA). Starting with a SWISSPROT accession code.
imprs-hd.mpg.de
HITS | International Max Planck Research School for Astronomy and Cosmic Physics
http://www.imprs-hd.mpg.de/3850/HITS
Skip to navigation (Press Enter). Skip to main content (Press Enter). The city of Heidelberg. IMPRS seminar WS 2016/17. IMPRS seminar WS 2014/15. IMPRS seminar SS 2015. IMPRS seminar WS 2015/16. IMPRS seminar SS 2016. Galaxy Evolution and Cosmology. IMPRS board of representatives. 12th generation fellows (2016). 11th generation fellows (2015) - A-H. 11th generation fellows (2015) - J-Z. 10th generation fellows (2014). 9th generation fellows (2013). Kalyan Kumar Radhakrishnan Santhakumari. And finally, wh...
bioms.de
Center for Modelling and Simulation in the Biosciences - BIOMS
http://www.bioms.de/links.php
Center for Modelling and Simulation in the Biosciences. European Molecular Biology Laboratory (EMBL). German Cancer Research Center (DKFZ). Heidelberg Institute for Theoretical Studies (HITS). Heidelberg Graduate School of Mathematical and Computational Methods for the Science (HGS MathComp). Interdisciplinary Center for Scientific Computing (IWR). Max Plank Institute for Medical Research. The Mathematics Center Heidelberg (MATCH).
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