algolab.eu
Events | Experimental Algorithmics Lab – Algolab
https://algolab.eu/events
Experimental Algorithmics Lab – Algolab. Combinatorial structures for sequence analysis in bioinformatics 2013. Computability in Europe 2013. We list here the main events organized by some members of AlgoLab:. Advanced Techniques for Combinatorial Algorithms. Computatibility in Europe 2013. PhD course: Massive data analysis in the Web and post-genomic era. Lectures (April-May 2012): 1. Introduction Part I April 16th (h. 10.30) Paola Bonizzoni (Università di Milano-Bicocca) The first lectures ...On Septem...
algolab.eu
Talks and Posters | Experimental Algorithmics Lab – Algolab
https://algolab.eu/talks
Experimental Algorithmics Lab – Algolab. Combinatorial structures for sequence analysis in bioinformatics 2013. Computability in Europe 2013. An in-silico framework for comparing and validating transcripts predicted from single and paired-end reads. Ernesto Picardi, Yuri Pirola. Graziano Pesole, and Paola Bonizzoni. Our experimental analysis reveals that using GSNAP instead of TopHat gives more specific predictions with also a minor (but statistically inconclusive) improvement in sensitivity. A fast and ...
algolab.eu
Yuri Pirola | Experimental Algorithmics Lab – Algolab
https://algolab.eu/people/pirola-yuri
Experimental Algorithmics Lab – Algolab. Combinatorial structures for sequence analysis in bioinformatics 2013. Computability in Europe 2013. Since May 2012, I am a post-doctoral fellow at DISCo, University of Milano-Bicocca. Milan) working on computational problems arising from large quantities of data now available in bioinformatics, with a special emphasis on haplotyping and gene structure prediction problems. And Parco Tecnologico Padano. From March to December 2010. Last update December 22, 2015).
algolab.eu
Simone Zaccaria | Experimental Algorithmics Lab – Algolab
https://algolab.eu/simone-zaccaria
Experimental Algorithmics Lab – Algolab. Combinatorial structures for sequence analysis in bioinformatics 2013. Computability in Europe 2013. I am a visiting PhD candidate at Brown University, in the Center for Computational Molecular Biology. Under the supervision of prof. Ben Raphael, I am currently working on problems arising from cancer genomics and my focus is on the reconstruction of phylogenies in the case of copy-number aberrations. My current research works have concerned problems concerning cop...
algolab.eu
Marco Previtali | Experimental Algorithmics Lab – Algolab
https://algolab.eu/people/previtali
Experimental Algorithmics Lab – Algolab. Combinatorial structures for sequence analysis in bioinformatics 2013. Computability in Europe 2013. I’m a PhD student in Computer Science at the department of Computer Science at the University of Milano-Bicocca (DISCo) since January 2014. I’m currently focusing my research activity on computational problems arising from bioinformatics and I’m currently developing LightStringGraph. A novel genome assembler that relies on efficient external memory usage. An extern...
algolab.eu
Didattica | Experimental Algorithmics Lab – Algolab
https://algolab.eu/didattica
Experimental Algorithmics Lab – Algolab. Combinatorial structures for sequence analysis in bioinformatics 2013. Computability in Europe 2013. Nella sezione didattica si possono trovare le informazioni relative agli insegnamenti tenuti dai componenti di AlgoLab. Tesi: Algoritmi per l’assemblaggio di multiple stringhe di DNA. July 18, 2016. Tesi: Euristiche applicate all’assemblaggio di aplotipi. July 18, 2016. Tesi: Algoritmi di indicizzazione del grafo del pangenoma. April 28, 2016. February 5, 2016.
algolab.eu
People | Experimental Algorithmics Lab – Algolab
https://algolab.eu/people
Experimental Algorithmics Lab – Algolab. Combinatorial structures for sequence analysis in bioinformatics 2013. Computability in Europe 2013. Is a research group focused on developing efficient algorithms and software for computational problems. The group is associated with the CS Dept. Of Univ. Milano-Bicocca. But includes members of neighboring universities and research groups. Tesi: Algoritmi per l’assemblaggio di multiple stringhe di DNA. July 18, 2016. July 18, 2016. April 28, 2016. February 5, 2016.
algolab.eu
Raffaella Rizzi | Experimental Algorithmics Lab – Algolab
https://algolab.eu/people/rizzi
Experimental Algorithmics Lab – Algolab. Combinatorial structures for sequence analysis in bioinformatics 2013. Computability in Europe 2013. My primary interest is sequence alignment with particular attention to the problem of aligning biological sequences. I am currently working on the problem of predicting the exon-intron structure of a gene and its alternative transcripts. Alternative splicing is a fundamental mechanism of protein differentiation in eukaryotic organisms. Please refers to my home page.
algolab.eu
Stefano Beretta | Experimental Algorithmics Lab – Algolab
https://algolab.eu/people/beretta
Experimental Algorithmics Lab – Algolab. Combinatorial structures for sequence analysis in bioinformatics 2013. Computability in Europe 2013. I have received my Ph.D. in Computer Science in 2013 at DISCo (Dipartimento Informatica, Sistemistica e Comunicazione), Università degli Studi di Milano – Bicocca, where I have received my B.Sc. and M.Sc. degrees in Computer Science. Dept Informatica, Sistemistica e Comunicazione (DISCo). Università degli Studi di Milano – Bicocca. Building U14 – Room 1047. October...
algolab.eu
Anna Paola Carrieri | Experimental Algorithmics Lab – Algolab
https://algolab.eu/people/carrieri
Experimental Algorithmics Lab – Algolab. Combinatorial structures for sequence analysis in bioinformatics 2013. Computability in Europe 2013. Personal page of Anna Paola Carrieri. Currently I am at the 1st year of my Ph.D. in Computer Science at DISCo (Dipartimento Informatica, Sistemistica e Comunicazione), Università degli Studi di Milano – Bicocca, where I have received my M.Sc. degree in Computer Science. My research activities are mainly focused on Bioinformatics. Building U14 – Room 1047. October 2...
