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pFind

pFind Studio: a computational solution for mass spectrometry-based proteomics. pFind是目前国内唯一的具有自主知识产权的蛋白质鉴定引擎。我们是中科院计算所pFind团队,开发了蛋白质鉴定引擎pFind,以及一系列质谱数据分析软件。我们最近在Nature Methods期刊上发表了文章,这是国内蛋白质组学第一篇。

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pFind | pcluster.net Reviews
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pFind Studio: a computational solution for mass spectrometry-based proteomics. pFind是目前国内唯一的具有自主知识产权的蛋白质鉴定引擎。我们是中科院计算所pFind团队,开发了蛋白质鉴定引擎pFind,以及一系列质谱数据分析软件。我们最近在Nature Methods期刊上发表了文章,这是国内蛋白质组学第一篇。
<META>
KEYWORDS
1 pFind
2 蛋白质组学
3 蛋白质鉴定
4 定量蛋白质组学
5 质谱
6 翻译后修饰
7 蛋白质基因组学
8 mass spectrometry
9 proteomics
10 protein identification
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pFind | pcluster.net Reviews

https://pcluster.net

pFind Studio: a computational solution for mass spectrometry-based proteomics. pFind是目前国内唯一的具有自主知识产权的蛋白质鉴定引擎。我们是中科院计算所pFind团队,开发了蛋白质鉴定引擎pFind,以及一系列质谱数据分析软件。我们最近在Nature Methods期刊上发表了文章,这是国内蛋白质组学第一篇。

INTERNAL PAGES

pcluster.net pcluster.net
1

Benchmark

http://www.pcluster.net/benchmark.html

PFind Studio: a computational solution for mass spectrometry-based proteomics. Study Goal of iPRG 2013: Compare number of extra identification due to single nucleotide variants vs. novel sequences. Our results are marked by 'pFind'. [see the slides of ABRF.]. This year’s study focused on detecting modified peptides in a complex mixture, with beam-type CID from a Q-TOF type instrument. Our result is numbered ‘97053i’. [see the poster of ABRF.]. 1 iPRG 2010 study announcement. 3 iPRG 2010 poster.

2

pLabel

http://www.pcluster.net/software/pLabel/index.html

PFind Studio: a computational solution for mass spectrometry-based proteomics. Is a mass spectral peak labeling software developed for proteomics research. Main Functions:. 1 Supporting labeling a batch of spectra. Data and search result can be imported directly at the same time. 2 Supporting multiple formats of data type (dta, mgf, ms2) and results of multiple search engines (pFind, Mascot, SEQUEST). 3 Supporting ECD/ETD spectra labeling. 4 Supporting multiple AA sites, multiple types of modification.

3

Downloads

http://www.pcluster.net/downloads.html

PFind Studio: a computational solution for mass spectrometry-based proteomics. Please read carefully the pFind Studio Software License Agreement. Before downloading and using the software. Please fill in the registered table. And email it to pfind@ict.ac.cn. To get the registration key. For anyone who used pFind in the published paper, please cite:. PFind Studio version 2.8.6 for Windows. Feb 3rd, 2016 -. PFind Studio 2.8 including pFind. Is available now. Access Software. Important new features include:.

4

pFind

http://www.pcluster.net/software/pFind/index.html

PFind Studio: a computational solution for mass spectrometry-based proteomics. Is a search engine system for automated peptide and protein identification from tandem mass spectra. Rapid Communications in Mass Spectrometry, 21,2985-2991,2007. [abstract]. PFind 2.0: a software package for peptide and protein identification via tandem mass spectrometry. Le-Heng Wang, De-Quan Li, Yan Fu, Hai-Peng Wang, Jing-Fen Zhang, Zuo-Fei Yuan,Rui-Xiang Sun, Rong Zeng, Si-Min He, Wen Gao.

5

pBuild

http://www.pcluster.net/software/pBuild/index.html

PFind Studio: a computational solution for mass spectrometry-based proteomics. PBuild is a tool that can compare several search engines' results and combine them together. The latest version, pBuild v2.0, can process the search results of pFind, Mascot and SEQUEST. It is developed in the C programming language and you can run it in the Windows operating system. The main functions of pBuild are as follows:. 2 Comparing different engines' results and combining them together. 3 Plotting FPR curves.

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Proteins are vital parts of living organisms, as they are the main components of the physiological metabolic pathways of cells. While proteomics generally refers to the large-scale experimental analysis of proteins, it is often specifically used for protein purification and mass spectrometry which is an analytical technique that measures the mass-to-charge ratio of charged particles. March 24, 2018. The pFind team climbed the Fragrant Hill and boarded the peak. February 7, 2018. January 26, 2018. The mis...

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Proteins are vital parts of living organisms, as they are the main components of the physiological metabolic pathways of cells. While proteomics generally refers to the large-scale experimental analysis of proteins, it is often specifically used for protein purification and mass spectrometry which is an analytical technique that measures the mass-to-charge ratio of charged particles. March 24, 2018. The pFind team climbed the Fragrant Hill and boarded the peak. February 7, 2018. January 26, 2018. The mis...

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