piggenome.org
International Swine Genome Sequencing ConsortiumHome page for the International Swine Genome Sequencing Consortium [SGSC]'s newsletter and porcine genome sequencing project.
http://www.piggenome.org/
Home page for the International Swine Genome Sequencing Consortium [SGSC]'s newsletter and porcine genome sequencing project.
http://www.piggenome.org/
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International Swine Genome Sequencing Consortium | piggenome.org Reviews
https://piggenome.org
Home page for the International Swine Genome Sequencing Consortium [SGSC]'s newsletter and porcine genome sequencing project.
PigEST
http://pigest.ku.dk/notes/news.html
The accompaying PigEST paper has been published in Genome Biology. Home page lunched. The KVL PigEST resource v. 1.0 contains assembly of more than 1 million EST sequences. Access the server here. Comments, questions, etc., email webmaster@pigest.ku.dk. Last updated May 11th, 2007 by Jan Gorodkin.
PigEST
http://pigest.ku.dk/server/index.html
To access the Distiller database of the assembly. You can enter each assembly obtain detailed information, such as alternative splice variants, indication of SNPs as well as search facilities. Server no longer available]. For usage of the data please cite:. Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags. J Gorodkin et al., Genome Biology 8:R45, 2007. Comments, questions, etc., email webmaster@pigest.ku.dk.
UCSC Genome Browser: News Archives
http://genomebrowser.wustl.edu/goldenPath/newsarch.html
16 August 2012 - Announcing a Genome Browser for the Medium ground finch. We have released a browser for the Medium ground finch,. Issued by the UCSC Center for Biomolecular Science and Engineering (CBSE). Genome, see the NCBI website. Bulk downloads of the sequence and annotation data are available via the Genome Browser FTP server. Page The browser annotation tracks were generated by UCSC and collaborators worldwide. See the Credits. WTSI version Devil refv7.0, UCSC version sarHar1). The Tasman...Bulk ...
PigEST
http://pigest.ku.dk/notes/introduction.html
To conduct Gene Ontology analysis we matched the consensus and singleton sequences against UniProt. This comparison is available in the static download section. When entering the distiller database a comparison to nr will be available, as nr is the only protein database integrated into distiller at the moment. In a few instances sequences are not match against UniProt, but nr only (due to more conservative criteria in entering the UniProt database). More details about the work can be found in:.
UCSC Genome Browser: News Archives
http://epigenome.wustl.edu/goldenPath/newsarch.html
16 August 2012 - Announcing a Genome Browser for the Medium ground finch. We have released a browser for the Medium ground finch,. Issued by the UCSC Center for Biomolecular Science and Engineering (CBSE). Genome, see the NCBI website. Bulk downloads of the sequence and annotation data are available via the Genome Browser FTP server. Page The browser annotation tracks were generated by UCSC and collaborators worldwide. See the Credits. WTSI version Devil refv7.0, UCSC version sarHar1). The Tasman...Bulk ...
The Sino-Danish Pig Genome Project
http://www.piggenome.dk/sg.html
The Sino-Danish Pig Genome Project. Pigs in sequence space: A 0.66X coverage pig genome survey based on shotgun sequencing. Rasmus Wernersson, Mikkel H Schierup, Frank G Jorgensen, Jan Gorodkin, Frank Panitz, Hans-Henrik Staerfeldt, Ole F Christensen, Thomas Mailund, Henrik Hornshoj, Ami Klein, Jun Wang, Bin Liu, Songnian Hu, Wei Dong, Wei Li, Gane K-S Wong, Jun Yu, Jian Wang, Christian Bendixen, Merete Fredholm, Soren Brunak, Huanming Yang, Lars Bolund. BMC Genomics 2005, 6:70 (10 May 2005). Pigdb genom...
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The Sino-Danish Pig Genome Project
The Sino-Danish Pig Genome Project. The Sino-Danish pig genome sequencing project has generated a resource of 3.8 million shotgun reads 0.66 coverage and approximately 1 million EST sequences. Here is a short list of generated resources:. EST resource: Expression analysis, ncRNA, and mitochondria: pigest.ku.dk. And pigest.ku.dk/more. EST resource: SNP analysis available at DIAS http:/ snp.agrsci.dk. General screens of the data). BMC Genomics, 8:367 (Oct 11), 2007. BMC Genomics, 8:316 (Sep 10), 2007.
International Swine Genome Sequencing Consortium
Swine genome sequencing consortium (sgsc). Please visit: piggenome.dk. SGSC MISSION and Goals. Gerard Albers, Nutreco. Alan L. Archibald, Roslin Institute. Craig W. Beattie, University of Illinois at Chicago. Jonathan E. Beever, University of Illinois. M Boggess, National Pork Board, USA. Joseph P. Cassady, North Carolina State Univeristy. Patrick Chardon, INRA-Jouy-en-Joysas. Bhanu Chowdhary, Texas A and M University. Kellye Eversole, Alliance for Animal Genome Research. Merete Fredholm, KVL, Denmark.
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