sysbio.genome.clemson.edu

Welcome to GeneNet Engine | GeneNet Engine v0.9

GeneNet Engine v0.9. A network biology resource for genotype-phenotype relationship and biomarker discovery. One global and 23 GIL co-expression networks. For global) and link-community. Overlap with traits from over 8000 QTLs from Gramene. Overlap with traits from GWAS SNPs. Functional Enrichment analysis with GO, InterPro, KEGG, RiceCyc terms. 3 Million SNPs from NCBI dbSNP. Serve as potential bio markers. One global, 9 tissue specific and 86 GIL co-expression networks. 6K SNPs from NCBI dbSNP.

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Welcome to GeneNet Engine | GeneNet Engine v0.9 | sysbio.genome.clemson.edu Reviews

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GeneNet Engine v0.9. A network biology resource for genotype-phenotype relationship and biomarker discovery. One global and 23 GIL co-expression networks. For global) and link-community. Overlap with traits from over 8000 QTLs from Gramene. Overlap with traits from GWAS SNPs. Functional Enrichment analysis with GO, InterPro, KEGG, RiceCyc terms. 3 Million SNPs from NCBI dbSNP. Serve as potential bio markers. One global, 9 tissue specific and 86 GIL co-expression networks. 6K SNPs from NCBI dbSNP.

<META> KEYWORDS

1 navigation

2 species

3 arabidopsis thaliana

4 oryza sativa rice

5 zea mays maize

6 species data summary

7 oryza sativa

8 rice

9 wgcna

10 modules for gils

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navigation,species,arabidopsis thaliana,oryza sativa rice,zea mays maize,species data summary,oryza sativa,rice,wgcna,modules for gils,study,and link community,modules,zea mays,maize,one global network

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Welcome to GeneNet Engine | GeneNet Engine v0.9 | sysbio.genome.clemson.edu Reviews

https://sysbio.genome.clemson.edu

GeneNet Engine v0.9. A network biology resource for genotype-phenotype relationship and biomarker discovery. One global and 23 GIL co-expression networks. For global) and link-community. Overlap with traits from over 8000 QTLs from Gramene. Overlap with traits from GWAS SNPs. Functional Enrichment analysis with GO, InterPro, KEGG, RiceCyc terms. 3 Million SNPs from NCBI dbSNP. Serve as potential bio markers. One global, 9 tissue specific and 86 GIL co-expression networks. 6K SNPs from NCBI dbSNP.

INTERNAL PAGES

sysbio.genome.clemson.edu

1

Arabidopsis thaliana | GeneNet Engine v0.9

http://sysbio.genome.clemson.edu/species/arabidopsis_thaliana

GeneNet Engine v0.9. A network biology resource for genotype-phenotype relationship and biomarker discovery. Click Networks in the Resources menu to the right to view a list of all networks for this species. In summary, the following networks are available:. The arabidopsis global gene co-expression network v1.0. Arabidopsis K90 GIL-collection- a set of 86 networks built from pre-clustering of input samples. Affymetrix GeneChip Arabidopsis ATH1 Genome Array. Genomic data at TAIR (v10).

2

Species | GeneNet Engine v0.9

http://sysbio.genome.clemson.edu/species

GeneNet Engine v0.9. A network biology resource for genotype-phenotype relationship and biomarker discovery. Click Networks in the Resources menu to the right to view a list of all networks for this species. In summary, the following networks are available:. The arabidopsis global gene co-expression network v1.0. Arabidopsis K90 GIL-collection- a set of 86 networks built from pre-clustering of input samples. Rice is one of the most important staple crops and serves as the model species for the. Maize is ...

3

Oryza sativa | GeneNet Engine v0.9

http://sysbio.genome.clemson.edu/species/oryza_sativa

GeneNet Engine v0.9. A network biology resource for genotype-phenotype relationship and biomarker discovery. Rice is one of the most important staple crops and serves as the model species for the. Click Networks in the Resources menu to the right to view a list of all networks for this species. In summary, the following networks are available:. The rice global gene co-expression network v1.0. Rice K25 GIL-collection- a set of 22 networks built from pre-clustering of input samples. Ficklin SP, Luo F, Felt...

4

Welcome to GeneNet Engine | GeneNet Engine v0.9

http://sysbio.genome.clemson.edu/home

GeneNet Engine v0.9. A network biology resource for genotype-phenotype relationship and biomarker discovery. One global and 23 GIL co-expression networks. For global) and link-community. Overlap with traits from over 8000 QTLs from Gramene. Overlap with traits from GWAS SNPs. Functional Enrichment analysis with GO, InterPro, KEGG, RiceCyc terms. 3 Million SNPs from NCBI dbSNP. Serve as potential bio markers. One global, 9 tissue specific and 86 GIL co-expression networks. 6K SNPs from NCBI dbSNP.

5

Zea mays | GeneNet Engine v0.9

http://sysbio.genome.clemson.edu/species/zea_mays

GeneNet Engine v0.9. A network biology resource for genotype-phenotype relationship and biomarker discovery. Click Networks in the Resources menu to the right to view a list of all networks for this species. In summary, the following networks are available:. The Maize v1.0 global gene co-expression network. Information and data required to construct the networks for this species can be found at the following locations:. Affymetrix Maize Array plaform files. Genomic Data at MaizeSequence.org.

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tripal.info

Sites Using Tripal | Tripal

http://www.tripal.info/sites_using_tripal

Skip to main content. The following is a list of some of the sites that have adopted Tripal. If you would like your site listed please let us know by joining the Tripal mailing list. And sending a request. Http:/ banana-genome.cirad.fr/. Http:/ www.cacaogenomedb.org/. Http:/ www.citrusgenomedb.org/. Cool Season Food Legume Database. Http:/ www.coolseasonfoodlegume.org. Http:/ www.cottongen.org/. Http:/ www.fagaceae.org/. Http:/ sysbio.genome.clemson.edu/. Genome Database for Rosaceae.

allelesystems.com

Services | Allele Systems

http://www.allelesystems.com/services

Systems Genetics and Bioinformatics. Systems Genetics and Network Biology. Network Biology and Systems Genetics. Sub-genome/EST assembly (454, Illumina, Sanger). Please see our publication list. For additional areas of expertise. Is a collection of open-source freely available Drupal. Modules and is a member of the GMOD. Family of tools. Tripal serves as a web interface for the GMOD Chado databas. Please see a collection of plant co-expression networks in the GeneNet Engine at Clemson University.

allelesystems.com

GeneNet Engine | Allele Systems

http://www.allelesystems.com/genenet_engine

Systems Genetics and Bioinformatics. Raquo; GeneNet Engine. The GeneNet Engine v0.9 at Clemson University. Is an example of the online systems genetics and data mining platform provided by Allele systems. It incorporates genetic, genomic and network biology (co-expression networks) into a single platform for discovery of potential gene targets for further study of complex traits. GeneNet Engine uses GMOD Chado. And custom extension modules specific for network biology and systems genetics.

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Welcome to GeneNet Engine | GeneNet Engine v0.9

GeneNet Engine v0.9. A network biology resource for genotype-phenotype relationship and biomarker discovery. One global and 23 GIL co-expression networks. For global) and link-community. Overlap with traits from over 8000 QTLs from Gramene. Overlap with traits from GWAS SNPs. Functional Enrichment analysis with GO, InterPro, KEGG, RiceCyc terms. 3 Million SNPs from NCBI dbSNP. Serve as potential bio markers. One global, 9 tissue specific and 86 GIL co-expression networks. 6K SNPs from NCBI dbSNP.

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Welcome to our new graduate student, Jason Grosch! Welcome to our new undergraduate student, Sarah Reifeis! Congratulations to Yeiji Im on earning the Frank Mathers Undergraduate Summer Research Scholarship! Congratulations to our Hutton Honor College Undergraduate Research Grant winners, Yeiji Im, Alice Shen, and Claire VanLandingham! A Abi Mansour and P. Ortoleva, J. Chem. Theory Comput., A Multiscale Factorization Method for Simulating Mesoscopic Systems with Atomic Precision. A Singharoy et tal.

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You are not logged in, Register. An organized, multidisciplinary and inclusive scientific community devoted to the understanding of complex biological processes for biosociety development. An organized, multidisciplinary and inclusive scientific community devoted to the understanding of complex biological processes for biosociety development. An organized, multidisciplinary and inclusive scientific community devoted to the understanding of complex biological processes for biosociety development. SYSBIO&#...