transcriptionfactor.org transcriptionfactor.org

transcriptionfactor.org

DBD: Transcription factor database Home

DBD: Transcription factor prediction database. DBD is a database of predicted transcription factors in completely sequenced genomes. The predicted transcription factors all contain assignments to sequence specific DNA-binding domain families. The predictions are based on domain assignments from the SUPERFAMILY. Hidden Markov model libraries. Benchmarks of our transcription factor predictions show they are accurate and have wide coverage on a genomic scale. From this website you can:. Recent updates to DBD.

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DBD: Transcription factor database Home | transcriptionfactor.org Reviews
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DBD: Transcription factor prediction database. DBD is a database of predicted transcription factors in completely sequenced genomes. The predicted transcription factors all contain assignments to sequence specific DNA-binding domain families. The predictions are based on domain assignments from the SUPERFAMILY. Hidden Markov model libraries. Benchmarks of our transcription factor predictions show they are accurate and have wide coverage on a genomic scale. From this website you can:. Recent updates to DBD.
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4 search dbd
5 browse genomes
6 browse families
7 download
8 links
9 introduction
10 and pfam
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DBD: Transcription factor database Home | transcriptionfactor.org Reviews

https://transcriptionfactor.org

DBD: Transcription factor prediction database. DBD is a database of predicted transcription factors in completely sequenced genomes. The predicted transcription factors all contain assignments to sequence specific DNA-binding domain families. The predictions are based on domain assignments from the SUPERFAMILY. Hidden Markov model libraries. Benchmarks of our transcription factor predictions show they are accurate and have wide coverage on a genomic scale. From this website you can:. Recent updates to DBD.

LINKS TO THIS WEBSITE

biodbs.info biodbs.info

DBD Database of Biological Biinformatics Database Database of biological Databases Database of Bioinformatics Database

http://www.biodbs.info/DT.html

Proceed by clicking the first alphabet of the keyword. ITIS, the Integrated Taxonomic Information System. Http:/ www.itis.gov/. Http:/ www.ncbi.nlm.nih.gov/sites/entrez? GRIN Taxonomy for Plants. Http:/ www.ars-grin.gov/cgi-bin/npgs/html/index.pl. TelDB (Human Telomere Information database). Http:/ www.genlink.wustl.edu/teldb/index.html. Http:/ www.fhcrc.org/science/labs/bedalov/telomeredatabase.html. Telomere (List of Telomere Information). Http:/ www.biophysica.com/telomere.html. Http:/ genome.imim...

bio123.com.cn bio123.com.cn

主要转录因子数据库

http://www.bio123.com.cn/htmls/TFDB/indexl.htm

数据库是基于真核生物转录调控所 建立的数据库 ,. 其中收集了大量与基因转录水平有关 的数据 ,. 公开版版 本的版本号为 TRANSFAC7.0;. 该数据库是由哥 本哈根大学 (University of Copenhagen). The Mouse Transcription Factor Database). 基因组科学中心 (RIKEN Genomic Sciences Center, GSC). 的基因组探测 研究组实验室 (Laboratory for Genome Exploration Re- search Group). Transcription Regulatory Regions Database). 该数据库由俄罗斯科学院西 伯利亚部的细胞学与遗传学研究所 (Institute of Cytol-ogy and Genetics, Siberian Department of the Russian Academy of Sciences, Novosibirsk, Russia). 数据库 包含的数据 种类及数据 量见表. 是基于研究基 因调控网络的需要而建立的数据库 ,.

collectf.org collectf.org

CollecTF homepage

http://www.collectf.org/browse/links

CollecTF aims at becoming a comprehensive resource for bacterial TF-binding site information, but it is by no means alone. If you cannot find what you are looking for here, please check out the alternatives below. Model organism-based transcriptional regulation databases provide details on TF-binding sites, protein-protein interactions, metabolic networks and more. Check these out:. Domain-wide databases on prokaryotic TF-binding sites including manual curation and in silico predictions.

flytf.org flytf.org

FlyTF.org: Data Categories

http://www.flytf.org/flytfmine/dataCategories.do

Transcription factor datamine for Drosophila melanogaster. The categories below provide views of the different types of data. Each category includes details of the data available, template queries which include these data and starting points for building your own query using these data. NOTE: All external links open in a new window. Genome annotation for D. melanogaster (R5.11). Orthologous Drosophilid genes also annotated. Crosby et al - PubMed: 17099233. UniProt Consortium - PubMed: 17142230.

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DBD: Transcription factor database Home

DBD: Transcription factor prediction database. DBD is a database of predicted transcription factors in completely sequenced genomes. The predicted transcription factors all contain assignments to sequence specific DNA-binding domain families. The predictions are based on domain assignments from the SUPERFAMILY. Hidden Markov model libraries. Benchmarks of our transcription factor predictions show they are accurate and have wide coverage on a genomic scale. From this website you can:. Recent updates to DBD.

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