wholecellkb.org
WholeCellKBComprehensive knowledge base of cell physiology.
http://www.wholecellkb.org/
Comprehensive knowledge base of cell physiology.
http://www.wholecellkb.org/
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WholeCellKB | wholecellkb.org Reviews
https://wholecellkb.org
Comprehensive knowledge base of cell physiology.
wholecellkb.org
WholeCellKB :: Genes
http://www.wholecellkb.org/list/Mgenitalium/Gene
ScRNA, signal recognition particle 4.5S RNA, MCS1. Rnase P RNA, MCS5, M1 RNA. Transfer-messenger RNA, tmRNA, MCS6, 10Sa RNA. DNA polymerase III, beta subunit. DNA gyrase, B subunit. DNA gyrase, A subunit. DNA polymerase III delta prime subunit, putative. TRNA modification GTPase TrmE. Multidrug ABC transporter, ATP-binding/permease protein. Multidrug ABC transporter, ATP-binding/permease protein. SNF2 family helicase putative. DNA-directed RNA polymerase, delta subunit. Translation elongation factor P.
WholeCellKB :: Processes
http://www.wholecellkb.org/list/Mgenitalium/Process
Last updated Sept. 21, 2012, 7:04 pm. Contact wholecell@lists.stanford.edu.
WholeCellKB
http://www.wholecellkb.org/Mgenitalium
Welcome to the Mycoplasma genitalium. Is a gram-positive bacterium and human pathogen. Among all freely-culturable organism, M. genitalium. Has the smallest genome, containing slightly more than 580 kb. Primarily due to its reduced genome size, M. genitalium. Has been the subject of intense research over the past thirty years. M. genitalium. Was the second organism to be completely sequenced, and the first organism to have its genome completely synthesized de novo. Transcr. reg. activity. Sources, by type.
WholeCellKB :: States
http://www.wholecellkb.org/list/Mgenitalium/State
Last updated Sept. 21, 2012, 7:04 pm. Contact wholecell@lists.stanford.edu.
WholeCellKB :: Protein complexes
http://www.wholecellkb.org/list/Mgenitalium/ProteinComplex
DNA POLYMERASE 2CORE BETA CLAMP GAMMA COMPLEX PRIMASE. DNA polymerase (2) core, β-clamp, γ-complex, and primase. DNA POLYMERASE CORE BETA CLAMP GAMMA COMPLEX. DNA polymerase core, β-clamp, and γ-complex. DNA POLYMERASE CORE BETA CLAMP PRIMASE. DNA polymerase core, β-clamp, and primase. DNA POLYMERASE GAMMA COMPLEX. DNA-directed DNA polymerase gamma complex. DNA-directed DNA polymerase holoenzyme. DNA polymerase III, beta clamp. MG 008 379 TETRAMER. MG 014 015 DIMER. MG 040 119 120 121 PENTAMER. MG 179 18...
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Frequently asked questions - Whole-cell Wiki
http://www.wholecell.org/wiki/index.php?title=Frequently_asked_questions
How can I run the model? How can I run a single sub-model? What language is the model implemented in? Why is the model implemented in MATLAB? Is MATLAB absolutely required? Can I use an older version of MATLAB? Do I really need MATLAB = 2009b? What platform is required to run the software? Is the knowledge base software required? What is the easiest way to use the knowledge base? What are the requirements to run the whole-cell virtual machine? How complete is the model? How were reaction kinetics curated?
WholeCell.org | About
http://www.wholecell.org/about.html
Covert Lab, Stanford. Karr Lab, Mt Sinai. Covert Lab, Stanford. Karr Lab, Mt Sinai. WholeCell.org is maintained by Jonathan Karr. Derek Macklin, and Markus Covert. Last updated Mar 9, 2015. Contact wholecell@lists.stanford.edu.
Karr Lab :: Publications
http://www.karrlab.org/publications
Karr Systems Biology Lab. Karr Systems Biology Lab. Cokelaer T, Bansal M, Bare C, Bila E, Bot BM, Neto EC, Eduati F, Gönen M, Hill SM, Hoff B, Karr JR. Küffner R, Menden MP, Meyer P, Nore R, Pratap A, Prill RJ, Weirauch MT, Costello JC, Stolovitzky G and Saez-Rodriguez J. DREAMTools: a Python package for scoring collaborative challenges. F1000Res. 4, 1030 (2015). Langner KM and Plewczynski D. Combined systems and structural modeling repositions antibiotics for Mycoplasma genitalium. Sanghvi JC, Macklin D...
Karr Lab :: Resources
http://www.karrlab.org/resources
Karr Systems Biology Lab. Karr Systems Biology Lab. Please use the links below to use the free, hosted versions of our software and download source code. In addition to the software packages listed here, we have also developed several utility libraries. These can be obtained from our MATLABCentral page. The first "whole-cell" model of the bacterium M. genitalium. Web-based software for creating model organism databases for whole-cell models. Implemented in Python using the Django framework. Graphical use...
WholeCell.org
http://www.wholecell.org/index.php?title=Frequently_asked_questions
Covert Lab, Stanford. Karr Lab, Mt Sinai. Covert Lab, Stanford. Karr Lab, Mt Sinai. Welcome to WholeCell.org! What is whole-cell modeling? The goal of whole-cell modeling is predict how genotype determines phenotype. Whole-cell models account for the specific function of every gene product and predict the dynamics of every molecule over the entire life cycle. Whole-cell models have the potential to enable engineers to rationally design cells to perform useful functions such as synthesizing drugs,...Sangh...
Whole-cell Wiki
http://www.wholecell.org/wiki
Welcome to the whole-cell wiki. This is a community resource for whole-cell modeling. Please register. To contribute to the wiki. What is whole-cell modeling? Getting started with whole-cell modeling. What is whole-cell modeling? The goal of whole-cell modeling is predict how genotype determines phenotype. Whole-cell models account for the specific function of every gene product and predict the dynamics of every molecule over the entire life cycle. Whole-cell models have the potential to enable e...30, 8...
WholeCell.org
http://www.wholecell.org/index.html
Covert Lab, Stanford. Karr Lab, Mt Sinai. Covert Lab, Stanford. Karr Lab, Mt Sinai. Welcome to WholeCell.org! What is whole-cell modeling? The goal of whole-cell modeling is predict how genotype determines phenotype. Whole-cell models account for the specific function of every gene product and predict the dynamics of every molecule over the entire life cycle. Whole-cell models have the potential to enable engineers to rationally design cells to perform useful functions such as synthesizing drugs,...Sangh...
WholeCell.org | Summer School, April 3-8 2016, Barcelona Spain
http://www.wholecell.org/school-2016.html
Covert Lab, Stanford. Karr Lab, Mt Sinai. Covert Lab, Stanford. Karr Lab, Mt Sinai. Who is the course for? The course is designed for PhD students and postdoctoral scholars who wish to gain training in large-scale dynamical modeling. See the pre-requesites section below for more information. The summer school will be held April 3-8, 2016 at the Center for Regulatory Genomics. In Barcelona, Spain. Associate Professor, University of Pittsburgh. Signaling, rule-based modeling. Group Leader, EMBL Heidelberg.
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Whole Ceeyena
August 1st, 2014. You know how I said I could make more tips and pointers videos? Well, I just made another one. Booyah! I enjoyed making it, and I enjoyed watching it. Just saying. Clicking this photo will take you to the video. It's been a chore figuring out how to keep exercise as part of my daily routine, when Baxter will NOT let me work out. He seriously is an attention whore with SO MUCH ENERGY! He laid down on his bed and watched me with only partial interest! Subscribe to: Posts (Atom).
WholeCell.org
Covert Lab, Stanford. Karr Lab, Mt Sinai. Covert Lab, Stanford. Karr Lab, Mt Sinai. Welcome to WholeCell.org! What is whole-cell modeling? The goal of whole-cell modeling is predict how genotype determines phenotype. Whole-cell models account for the specific function of every gene product and predict the dynamics of every molecule over the entire life cycle. Whole-cell models have the potential to enable engineers to rationally design cells to perform useful functions such as synthesizing drugs,...Sangh...
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WholeCellKB
Welcome to the Mycoplasma genitalium. Is a gram-positive bacterium and human pathogen. Among all freely-culturable organism, M. genitalium. Has the smallest genome, containing slightly more than 580 kb. Primarily due to its reduced genome size, M. genitalium. Has been the subject of intense research over the past thirty years. M. genitalium. Was the second organism to be completely sequenced, and the first organism to have its genome completely synthesized de novo. Transcr. reg. activity. Sources, by type.
Wholecell Logistics
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Whole Cell Accessories
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Whole Cell Accessories
Open to the Public. 2415 West Jefferson St. Joliet, IL 60435. 124 North Halsted St. Chicago Heights, IL 60411. Lansing, IL 60438.
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