idss.inesc-id.pt
Services | IDSS :: Information and Decision Support Systems Lab
http://idss.inesc-id.pt/services
POPSTAR – Public Opinion and Sentiment Tracking, Analysis, and Research. YEASTRACT – Yeast Search for Transcriptional Regulators And Consensus Tracking.
pathoyeastract.org
PathoYeastract
http://www.pathoyeastract.org/acknowledgments.php
This work was partially supported by the Portuguese Fundação para a Ciência e Tecnologia through PDTC, namely via the following project grant:. PTDC/BBB-BIO/4004/2014: "Deciphering the mechanisms of transcriptional regulation that control antifungal drug resistance in the pathogenic yeast Candida glabrata: aiming the development of improved diagnosis and therapeutic approaches". The PathoYeastract database was constructed based on the YEASTRACT database ( http:/ yeastract.com. Inglis DO, Arnaud MB, Binkl...
yeastmine.yeastgenome.org
YeastMine: Data Categories
http://yeastmine.yeastgenome.org/yeastmine/dataCategories.do
Search and retrieve S. cerevisiae data with YeastMine, populated by SGD and powered by InterMine. Data Updated on: Sep-28-2016. Genome annotation for Saccharomyces cerevisiae. Homologs for Saccharomyces cerevisiae. Ortholog and paralog relationships between MOD organisms: Yeast, Human, Mouse, Rat, Fly, Worm, Mosquito and Zebrafish. Yeast Human gene functional complementation. P POD (via SGD). Human disease gene annotations. Gene Ontology and Pathways. Physical and Genetic Interactions.
life-lab.net
LIFE - Laboratorio de Investigacao de Fatores de Estresse
http://www.life-lab.net/links.php
Links para outros sites sobre estresse. Saccharomyces cerevisiae genome database. Biologia Molecular e Bioinformatica Online. Molecular Biology and Bioinformatics Directory. Http:/ www.ncbi.nlm.nih.gov/guide. Http:/ www.genome.jp/kegg/pathway/map/map01100.html. Todos os direitos reservados LIFE 2002 -2011. Design by Web Target.
ypa.csbb.ntu.edu.tw
YPA » News
http://ypa.csbb.ntu.edu.tw/news.html
YPA version 1.6 is released. Posted at June 30, 2012 by Tien-Hao Chang (Darby Chang). YPA version 1.5 is released. In the revision of YPA 1.1. We have identified hundreds of errors in our TATA boxes. Our TATA boxes were retrieved from Basehoar et al. In 2004. Basehor et al. S work has marked the position as well as provided the sequence of each TATA box. However, we found 577 TATA boxes whose positions and sequences were inconsitent. In the revision of YPA 1.1. To see the detailed numbers of this release.
ypa.csbb.ntu.edu.tw
YPA » Settings
http://ypa.csbb.ntu.edu.tw/do?act=settings
Of interest. Data (such as. Not satisfied the following setting will not be shown in YPA. 1TFBS only (weak direct). 2TFB only (strong direct). 10TFBS and TFB and TFKO. 11TFBS and (TFB or TFKO). 12TFKO and (TFB or TFBS). 13TFBS or TFB or TFKO. Having the spcified data. For example, TFBS only. Shown in YPA must have. Data TFBS or TFB. Shown in YPA must have either. Data TFBS and (TFB or TFKO). Shown in YPA must have. Data and have either. SCPD (Zhu and Zhang, 1999). YEASTRACT (Teixeira et al. The highest 1...
ypa.csbb.ntu.edu.tw
YPA » Statistics
http://ypa.csbb.ntu.edu.tw/stat.html
Version 1.6 (current release). Indicate the corresponding data has been updated (quantity increased, new data, or other modifications such as an alternative collecting strategy was adopted) since the previous release. Number of genes with. Number of TATA box positions. SCPD (Zhu and Zhang, 1999). YEASTRACT (Teixeira et al. MYBS (Tsai et al. SwissRegulon (Pachkov et al. Gene pairs where the. Binds to the promoter of the gene. Number of physical protein-protein interactions. Number of genes with. Number of...
pedromonteiro.org
Pedro T. Monteiro
http://www.pedromonteiro.org/index.html
Pedro T. Monteiro. With a FCT Investigator grant. Rua Alves Redol 9. P-1000-029 Lisboa, Portugal. 351) 21 3100 320. I belong to http:/ CoLoMoTo.org. Consortium for Logical Models and Tools), a consortium of research groups interested in logical modelling. The consortium works on the definition of standards for model representation and interchange (especially the SBML qual format), and on the comparison of methods, models and tools. In this context, I am currently involved on the development of:. Database...
biodata.pt
BioData.pt
http://www.biodata.pt/resources.html
Database of regulatory associations between transcription factors and genes in S. cerevisiae. National database for the Cork Oak EST sequencing project. Ontology for describing biological plant-based experiments. Software for simulation and optimization of microbial systems for industrial biotechnology applications. Software for constructing metabolic models at the genome scale. Semantic web data management system for data processing, analysis, and visualization. Cork oak sRNA sequencing.
