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Yu Lab - Cornell University

Welcome to the home page for the Yu Lab at Cornell University! We perform research in the broad area of Biomedical Systems Biology with both high-throughput experimental (see Yu et al., Science. And integrative computational (see Wang et al., Nature Biotechnology. Functional and Comparative Genomics. Molecular and Dynamic Proteomics. Generating and analyzing genome-wide protein interactome (protein-protein and protein-DNA, in particular) maps for various organisms both computationally (with topological a...

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Haiyuan Yu

Weill Inst.●●●●●●●●●●●d Mol. Bio.

It●●ca , New York, 14853

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ha●●●●●●●●@cornell.edu

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Haiyuan Yu

Weill Inst.●●●●●●●●●●●d Mol. Bio.

It●●ca , New York, 14853

US

1.60●●●●9515

ha●●●●●●●●@cornell.edu

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Cornell University

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Yu Lab - Cornell University | yulab.org Reviews

<META> DESCRIPTION

Welcome to the home page for the Yu Lab at Cornell University! We perform research in the broad area of Biomedical Systems Biology with both high-throughput experimental (see Yu et al., Science. And integrative computational (see Wang et al., Nature Biotechnology. Functional and Comparative Genomics. Molecular and Dynamic Proteomics. Generating and analyzing genome-wide protein interactome (protein-protein and protein-DNA, in particular) maps for various organisms both computationally (with topological a...

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1 people

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3 publications

4 welcome

5 algorithms and tools

6 technology development

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Yu Lab - Cornell University | yulab.org Reviews

https://yulab.org

Welcome to the home page for the Yu Lab at Cornell University! We perform research in the broad area of Biomedical Systems Biology with both high-throughput experimental (see Yu et al., Science. And integrative computational (see Wang et al., Nature Biotechnology. Functional and Comparative Genomics. Molecular and Dynamic Proteomics. Generating and analyzing genome-wide protein interactome (protein-protein and protein-DNA, in particular) maps for various organisms both computationally (with topological a...

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hint.yulab.org

High-quality Interactomes

Enter proteins (max 10). Separate multiple entries by ";". Cutoff number of publications. Separate multiple entries by ";". Pull-down/Anti-bait or Anti-tag co-ip. Pull-down/Anti-bait or Anti-tag co-ip. Ticking this disables the high-quality filter). HINT has been updated. Version 3 is now online. Our databases are updated nightly. How to use HINT. A Input your favourite protein(s) separated by semicolons. B Choose the organism of your interest. C Choose the interaction type. Visit the Yu Lab website.

instruct.yulab.org

INstruct: a database of 3D protein interactome networks with structural resolution

A database of 3D protein interactome networks with structural resolution. A database of high-quality protein interactome networks annotated to 3D structural resolution. We currently catalogue 6585 human, 644 A. thaliana. 1273 S. cerevisiae. And 37 S. pombe. Structurally resolved interactions. The interactions shown on this site have been curated from some of the most popular interaction databases and filtered to reflect only binary interactions that meet our strict. Compile PDB co-crystal structures.

LINKS TO THIS WEBSITE

hint.yulab.org

High-quality Interactomes

http://hint.yulab.org/faq.html

1 Database query: Gene ids used in this database (Uniprot ids are allowed for all organisms). Entrez gene ids/Gene names. Entrez gene ids/Gene names. 2 How to use. A Input your favourite protein(s) separated by semicolons. B Choose the organism of your interest. C Choose the interaction type. D Input the minimum number of discrete publications that should confirm the interactions. Use semicolons to separate multiple entries. A maximum of 10 queries should be used at a time. Das J and Yu H.

instruct.yulab.org

INstruct: a database of 3D protein interactome networks with structural resolution

http://instruct.yulab.org/about.html

A database of 3D protein interactome networks with structural resolution. A paper describing INstruct is published in Bioinformatics. For each species, to construct a protein interactome network with structural resolution, we first compiled a list of high-quality binary interactions extracted from high-throughput, high-quality yeast two-hybrid (Y2H) assays and from eight major protein-protein interaction databases: BioGrid. Release of December 2011) or iPfam. Release 21). The set of Pfam domains on p...

wicmb.cornell.edu

Haiyuan Yu | Weill Institute for Cell and Molecular Biology

http://wicmb.cornell.edu/people/haiyuan-yu

Skip to main content. Weill Institute for Cell and Molecular Biology. Message from the Director. Research Assoc and Visiting Scholars. Research Assoc and Visiting Scholars. We perform research in the broad area of Biomedical Systems Biology with both high-throughput experimental and integrative computational methodologies. Biochemistry, Molecular and Cell Biology. Genetics, Genomics and Development.

hint.yulab.org

High-quality Interactomes

http://hint.yulab.org/index.html

Enter proteins (max 10). Separate multiple entries by ";". Cutoff number of publications. Separate multiple entries by ";". Pull-down/Anti-bait or Anti-tag co-ip. Pull-down/Anti-bait or Anti-tag co-ip. Ticking this disables the high-quality filter). HINT has been updated. Version 3 is now online. Our databases are updated nightly. How to use HINT. A Input your favourite protein(s) separated by semicolons. B Choose the organism of your interest. C Choose the interaction type. Visit the Yu Lab website.

hint.yulab.org

High-quality Interactomes

http://hint.yulab.org/batch.html

Batch Downloads of Protein Interactomes. Click here to download the entire high-quality binary interactome for H. sapiens. Click here to download the entire high-quality binary interactome for S. cerevisiae. Click here to download the entire high-quality binary interactome for S. pombe. Click here to download the entire high-quality binary interactome for M. musculus. Click here to download the entire high-quality binary interactome for D. melanogaster. Click here to download the entire high-quality co-c...

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Yu Lab - Cornell University

Welcome to the home page for the Yu Lab at Cornell University! We perform research in the broad area of Biomedical Systems Biology with both high-throughput experimental (see Yu et al., Science. And integrative computational (see Wang et al., Nature Biotechnology. Functional and Comparative Genomics. Molecular and Dynamic Proteomics. Generating and analyzing genome-wide protein interactome (protein-protein and protein-DNA, in particular) maps for various organisms both computationally (with topological a...

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Yu Lab - Cornell University

Welcome to the home page for the Yu Lab at Cornell University! We perform research in the broad area of Biomedical Systems Biology with both high-throughput experimental (see Yu et al., Science. And integrative computational (see Wang et al., Nature Biotechnology. Functional and Comparative Genomics. Molecular and Dynamic Proteomics. Generating and analyzing genome-wide protein interactome (protein-protein and protein-DNA, in particular) maps for various organisms both computationally (with topological a...

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Yu Lab | USC Stem Cell

Jump to the blog. Jump to the introduction. University of Southern California. Min Yu featured in USC Stem Cell video. November 7, 2016. Veronica Ortiz receives an NIH F31 fellowship award. October 6, 2016. What I’m reading: Min Yu offers a top pick. September 19, 2016. Harlyne J. Norris Research Tower. 1450 Biggy Street, NRT 3507. Los Angeles, CA 90033. Office (NRT 3507): 323-442-7943. Lab (NRT 3514): TBD. Principal Investigator Min Yu). Website by: USC Web Services.

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