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The Joint Center for Structural Genomics (JCSG) Homepage

The JCSG Production Center for the Protein Structure Initiative. The JCSG has developed and integrated new technologies, covering the gene-to-structure process, that facilitate high-throughput structural biology. The JCSG has determined high- resolution structures of more than 1000 proteins; many are first structural representatives of uncharacterized protein families. TOPSAN, Wiki-based information and annotation portal - learn about protein structures solved by structural genomics centers.

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The Joint Center for Structural Genomics (JCSG) Homepage | jcsg.org Reviews

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The JCSG Production Center for the Protein Structure Initiative. The JCSG has developed and integrated new technologies, covering the gene-to-structure process, that facilitate high-throughput structural biology. The JCSG has determined high- resolution structures of more than 1000 proteins; many are first structural representatives of uncharacterized protein families. TOPSAN, Wiki-based information and annotation portal - learn about protein structures solved by structural genomics centers.

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The Joint Center for Structural Genomics (JCSG) Homepage | jcsg.org Reviews

https://jcsg.org

The JCSG Production Center for the Protein Structure Initiative. The JCSG has developed and integrated new technologies, covering the gene-to-structure process, that facilitate high-throughput structural biology. The JCSG has determined high- resolution structures of more than 1000 proteins; many are first structural representatives of uncharacterized protein families. TOPSAN, Wiki-based information and annotation portal - learn about protein structures solved by structural genomics centers.

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www1.jcsg.org

The Joint Center for Structural Genomics (JCSG) Homepage

The JCSG Production Center for the Protein Structure Initiative. The JCSG has developed and integrated new technologies, covering the gene-to-structure process, that facilitate high-throughput structural biology. The JCSG has determined high- resolution structures of more than 1000 proteins; many are first structural representatives of uncharacterized protein families. TOPSAN, Wiki-based information and annotation portal - learn about protein structures solved by structural genomics centers.

INTERNAL PAGES

jcsg.org

1

JCSG Site Map

http://www.jcsg.org/prod/newscripts/menu/jcsg_menu_private.html

About Us [About Us]. Our Pipeline [Our Pipeline]. Active JCSG Target Status. This report give the position of each active protein in the pipelinene]. All JCSG Targets Status. Shows the progress of all JCSG targets]. Register or Modify Personal Target List]. Seach PDB for JCSG. Seach PDB for JCSG Structures]. Structure Stats [Structure Stats]. Stats - PSI SBKB. Stats - PSI SGKB]. JCSG Resources [JCSG Resources]. JCSG Technologies and Methodologies]. Protein Sequence Comparative Analysis]. TSRI - Wilson Lab.

2

JCSG News and Highlights

http://www.jcsg.org/prod/newscripts/news_highlights.shtml

JCSG News and Highlights. Recent News and Highlights. JCSG invited talks at the symposium entitled Bringing the Protein Structure Initiative to Your Laboratory. During the ACS Northwestern Regional Meeting, June 22-25, 2014, in Missoula, Montana ( http:/ norm2014.sites.acs.org/. The JCSG co-hosted the symposium Current Challenges in Structural Biology and Drug Discovery. April 25, 2014, in La Jolla, California ( http:/ www.scripps.edu/mb/wilson/Symposium TSRI ISCB 2.pdf. PI, Dr. Ian A. Wilson, wa...With ...

3

JCSG Structure Gallery

http://www.jcsg.org/prod/newscripts/structure_gallery/gallery.cgi

Order clones fom PSI Materials Repository. Darr; Deposition Date. Darr; PDB ID. Uarr; TargetDB ID. Uarr; Protein Accession. Uarr; Target Accession. Uarr; Local Accession. Uarr; Deposition Date. Download Tab Delimited Version. NMR STRUCTURE OF THE ACIDIC DOMAIN OF SYNCRIP (24-140). STRUCTURAL GENOMICS, UNKNOWN FUNCTION. NMR STRUCTURE OF THE HOMEODOMAIN TRANSCRIPTION FACTOR GBX1[E FROM HOMO SAPIENS. DUF1491 family protein, PF07372. NMR STRUCTURE OF A DUF1491 FAMILY PROTEIN (CC 1065) FROM CAU CRESCENTUS CB15.

4

Target List Selection

http://www.jcsg.org/prod/newscripts/public_targets/structure.html

Click anywhere on bar below to display a new range. Report Date: Thu 23-Apr-2015 11:45:48. Predicted HD superfamily hydrolase. A zinc-binding protein from cupin superfamily involved in tetracenomycin polyketide synthesis. Putative General Stress Protein 26 with a PNP-Oxidase like fold. Haloacid delahogenase-like family hydrolase. Serine hydrolase (alpha/beta hydrolase) [DPP6 catalytic domain-like] with a conserved catalytic triad (S108/D186/H217). Protein of unknown function with cystatin-like fold.

5

JCSG Data Archives

http://www.jcsg.org/datasets-info.shtml

JCSG Repository of Crystallographic Datasets. The Joint Center for Structural Genomics has created a unique repository of X-ray crystallographic datasets for the structures that it has solved and deposited in the Protein Data Bank. This archive contains the experimental data and analyses from the data collection, data reduction, phasing, density modification, model building and refinement of JCSG structures. It also. In most cases, phasing was carried out either by SeMet, MAD or Molecular Replacement.

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ffas.godziklab.org

FFAS03 documentation

http://ffas.godziklab.org/ffas-cgi/cgi/document.pl?ses=&rv=&lv=

Available lists of results. Align 2 sequences, dot plot. The databases are updated with the latest structural and sequence information (see Updates. Rychlewski, L., Jaroszewski, L., Li, W. and Godzik, A. (2000). Comparison of sequence profiles. Strategies for structural predictions using sequence information. Protein Science. Jaroszewski, L., Rychlewski, L. and Godzik, A. (2000). Improving the quality of twilight-zone alignments. Protein Science. 2013) doi: 10.1093. PubMed. Step 3: Calculation of an alig...

bioinformatics.sanfordburnham.org

Godzik Lab Website

http://bioinformatics.sanfordburnham.org/pages/servers.html

Bioinformatics and System Biology. BNAber: database of broadly neutralizing HIV antibodies. Our Institute is retiring the following domains in web and email:. Please replace them by sbpdiscovery.org. Bioinformatics Web Servers and Databases. Is a new, updated and maintained version of the F. Server is a pairwise flexible protein structure alignment server. See Bioinformatics, 2003, 19(Suppl 2):II246-II255. And Nucleic Acids Res. 2014 May 16. pii: gku394. Is a database that explores the intrinsic flexibil...

bioinf.spbau.ru

Computational Proteomics | Algorithmic Biology Lab

http://bioinf.spbau.ru/en/proteomics

Skip to main content. St Petersburg Academic University of the Russian Academy of Sciences. Tag generation for top-down mass spectra. Joint project with Pavel Pevzner’s lab. Yakov Sirotkin, Xiaowen Liu, Maxim Gladkikh, Pavel Pevzner and Kira Vyatkina,. Peptide Sequence Tags for Top-Down Spectra. Accepted to RECOMB CP 2012. MS-Align Tag ( download. Error correction for top-down mass spectra. Joint project with Pavel Pevzner’s lab. The procedure of spectrum interpretation starts with retrieval of isotopome...

ruppweb.org

Crystal Harvesting Robot

http://www.ruppweb.org/robot/robot_default.html

Cool Stuff and Gadgets. Buy on Amazon.com. FLorence, Nov 8 2010. EMBL, Aug 2010. My Vienna Air Site. How to become a Sponsor. Robotic crystal harvesting is finally becoming reality. They said it would never work, but now it is becoming reality. Sponsored by a NIH STTR grant, a team of systems and robotics engineers. At Square One Systems Design. Jackson, WY) and BR have designed and built the first semi-autonomous protein crystal harvesting robot. The first demonstration unit. Due to the modular design.

godziklab.org

Godzik Lab Website

http://www.godziklab.org/pages/people.html

Bioinformatics and System Biology. BNAber: database of broadly neutralizing HIV antibodies. Our Institute is retiring the following domains in web and email:. Please replace them by sbpdiscovery.org. People In Godzik Lab. Sorted by Last Name. Adam Godzik, Ph.D. Bioinformatics and Systems Biology. Professor, PI, Program Director. Tel: 858-646-3100 x 3168. Tel: 858-646-3100 ext 3790. Yuanyuan Chang, Ph.D. Tel: 858-646-3100 ext 4146. Piotr Cieplak, Ph.D. Research Ass. Professor. Tel: 858-646-3100 ext 3076.

psimr.asu.edu

PSI:Biology-Materials Repository

http://psimr.asu.edu/MRLinks.html

PSI:Biology Material Repository Links. DNASU Twitter feed @DNASUPlasmids. For ordering PSI plasmids. For Next Generation and Sanger Sequencing. Virginia G. Piper Center for Personlized Diagnostics. The research center housing the PSI:Biology-Materials Repository. PSI Structural Biology Knowledgebase. Structural, Biological, Annotation, and Experimental data. NIH/NIGMS PSI:Biology Initiative Website. University of California - San Francisco. CSMP Biological Partner - University of Kansas. Integrated Cente...

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jcsg.org

The Joint Center for Structural Genomics (JCSG) Homepage

The JCSG Production Center for the Protein Structure Initiative. The JCSG has developed and integrated new technologies, covering the gene-to-structure process, that facilitate high-throughput structural biology. The JCSG has determined high- resolution structures of more than 1000 proteins; many are first structural representatives of uncharacterized protein families. TOPSAN, Wiki-based information and annotation portal - learn about protein structures solved by structural genomics centers.

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Once Upon a Time. Once Upon a Time. Song: You're My Angel. Gem of Life and TVB Forensic Hereos),. Sung by Loretta Chow ,. Images of LTS from Google Image,. Video produced by MdmChris,. Once upon a time. Archangel in the sky. Made a cover every night. Once upon a time. The angel loved me so. In the snow, my heart won't be cold. You are my angel. Tell me what you know. Something should be told. You are my angel. Tell me where you go. I will brace behind your throne. Once upon a time. My angel gave me life.

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