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Kavraki group in March 2017. Planning motions for the legged version of Robonaut2 inside the International Space Station. We have developed a method to explore flexibility of large macromolecules. Task and motion planning. In integrated task and motion planning, a search for a sequence of discrete actions is interleaved with finding continuous motions. Physics simulation-based motion planning. We have developed a new docking protocol for large ligands and were able to predict new binding modes.

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Lydia Kavraki

Lydia Kavraki

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Lydia Kavraki

Lydia Kavraki

Dept. of Co●●●●●●●●●●●ence MS 132

Ho●●on , TX, 77005

US

1.71●●●●5737

ka●●●●●@rice.edu

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Kavraki group in March 2017. Planning motions for the legged version of Robonaut2 inside the International Space Station. We have developed a method to explore flexibility of large macromolecules. Task and motion planning. In integrated task and motion planning, a search for a sequence of discrete actions is interleaved with finding continuous motions. Physics simulation-based motion planning. We have developed a new docking protocol for large ligands and were able to predict new binding modes.

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Kavraki Lab | Home | kavrakilab.org Reviews

https://kavrakilab.org

Kavraki group in March 2017. Planning motions for the legged version of Robonaut2 inside the International Space Station. We have developed a method to explore flexibility of large macromolecules. Task and motion planning. In integrated task and motion planning, a search for a sequence of discrete actions is interleaved with finding continuous motions. Physics simulation-based motion planning. We have developed a new docking protocol for large ligands and were able to predict new binding modes.

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ompl.kavrakilab.org

The Open Motion Planning Library

Japanese Introduction to OMPL. Use OMPL within Other Systems. Ompl on Bitbucket (Mercurial). Omplapp on Bitbucket (Mercurial). Ompl on Travis CI (Linux). Omplapp on Travis CI (Linux). Ompl on AppVeyor CI (Windows). Omplapp on AppVeyor CI (Windows). The Open Motion Planning Library. The front-end for OMPL. Contains a lightweight wrapper for the FCL. Collision checkers and a simple GUI based on PyQt. Current version: 1.3.2. Released: Nov 11, 2017. Click for citation,. If you use OMPL in your work. OMPL con...

labelhash.kavrakilab.org

The LabelHash Server

1DWW (EC 1.14.13.39). 7MHT (EC 2.1.1.73). 1JG1 (EC 2.1.1.77). 1KPG (EC 2.1.1.79). 1UCN (EC 2.7.4.6). 1ANI (EC 3.1.3.1). 1CZF (EC 3.2.1.15). 8TLN (EC 3.4.24.27). 1LBF (EC 4.1.1.48). 1AYL (EC 4.1.1.49). 2AHJ (EC 4.2.1.84). 1EP0 (EC 5.1.3.13). 1DID (EC 5.3.1.5). 1GGM (EC 6.1.1.14). 1B7Y (EC 6.1.1.20). 1ADY (EC 6.1.1.21). 1KP3 (EC 6.3.4.5). The output of these presets has been pre-computed and can be downloaded from the help page. Structure used for motif. Or upload a PDB file. Chain id for motif.

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kavrakilab.org

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Kavraki Lab | Research

http://www.kavrakilab.org/biomedicalcomputing

Functional annotation of proteins [related publications]. Functional Annotation of Proteins. Proteins and drugs [related publications]. Tracing Conformational Changes in Proteins. Nonlinear Dimensionality Reduction for the Analysis of Protein Motion. Sampling-Based Modeling of Equilibrium Fluctuations in Proteins. Exploring the Dynamics and Energetics of Protein Complexes. Multiscale Representation of Proteins. Metabolic networks [related publications]. Other biomedical computing [related publications].

2

Kavraki Lab | Robotics

http://www.kavrakilab.org/robotics

Below are brief descriptions of some past and current projects. Planning from High-Level Specifications [related publications]. Counterexample Search-based Approach for Safety Analysis of Hybrid Systems. Falsification of Safety Specifications using Sampling-based Algorithms. Temporal Logic Motion Planning. Kinodynamic Systems [related publications]. Kinodynamic Planning by Interior-Exterior Cell Exploration ( KPIECE. Path-Directed Subdivision Tree Exploration ( PDST. Guided Expansive Spaces Trees. The Ka...

3

Kavraki Lab | Openings

http://www.kavrakilab.org/openings

Postdoctoral Position in Computational Bioengineering. Postdoctoral Position in Robotics. Positions are available at the beginning of each academic year in both robotics and bioinformatics. Candidates should contact Lydia Kavraki (kavraki/AT/rice.edu, tel: 713-348-5737) directly for more information. Undergraduate Research Opportunity in Robotics. This is a research job for an undergraduate interested in modeling and simulating physically realistic robot motions. The main requirements are programming exp...

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Segunda-feira, 30 de março de 2015. Immunology is in the air. Uma interessante e didática animação disponível no site da Nature Immunology sobre a patogenia da asma! Enjoy e boa semana a todos. Post por Josiane Sabbadini Neves. Domingo, 29 de março de 2015. Journal Club IBA: Imuno-complexos: apenas espectadores inocentes durante uma infecção crônica viral? Figura demonstrando que ICs se ligam em receptores FC. Nesse sentido, os trabalhos de Yamada et al. (. E Weiland et al. (. Publicados na edição de fev...

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Women in Engineering : Rice University George R. Brown School of Engineering

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Menu "About" Begins - Skip Menu. Meet Our Grad Students. Graduate Studies at Rice. Master's in Computational Science and Engineering. Faculty Distinctions and Awards. Menu "Faculty Search: Molecular Nanotech" Begins - Skip Menu. Faculty Search: Molecular Nanotech. Rice Engineering Magazine 2015. Women Engineers at Rice. The Numbers (Fall 2015). Total undergraduate students in the School of Engineering: 1,500. Total undergraduate women in the School of Engineering: 518. Percentage women: 34.5. Women facul...

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morteza lahijanian curriculum vitae

http://www.mortezalahijanian.com/cv.html

Below, I have listed a summary of my C.V. For a more complete version, please email. Mechanical Engineering Ph.D. 09/06 - 07/12 Boston University. 01/01 - 12/04 University of California, Berkeley. 12/15 - Present Dept. of Computer Science, University of Oxford. Safety, trust, and integrity of autonomous mobile robots and. Enabling a pervasive technology of the future. 09/12 - 09/15 Dept. of Computer Science, Rice University. Post Doctoral Research Associate:. And Computer-Aided Verification and Reasoning.

labelhash.kavrakilab.org

The LabelHash Server

http://labelhash.kavrakilab.org/viewmatch.html

Whether you use the online server. Or the command line version. Of LabelHash, you will probably want to visually inspect your matches. We have developed a plugin for Chimera called ViewMatch that allows you to do just that. Below you will find detailed instructions on installing and using this plugin. Installation instructions for ViewMatch. Download and install a recent version of Chimera. To make Chimera detect the ViewMatch plugin, go to the Favorites menu and select Preferences. Select the Tools ...

labelhash.kavrakilab.org

The LabelHash Server

http://labelhash.kavrakilab.org/labelhash.html

Large-Scale Structural Motif Matching and Visualization. Motif matching can also be done through the LabelHash web server. You can use the LabelHash tools to visualize and further analyze the results. Compared to the web server, the command line tools and the Python module offer more flexibility in how the LabelHash table is constructed and how matching is performed. Created by Mark Moll. Drew H. Bryant. And Lydia E. Kavraki. Physical and Biological Computing Group. Bull; Department of Computer Science.

labelhash.kavrakilab.org

The LabelHash Server

http://labelhash.kavrakilab.org/acknowledgements.html

This project was performed pursuant to Baylor College of Medicine Grant No. DBI-054795 from the National Science Foundation. Lydia Kavraki has also been supported by a Sloan Fellowship. The computers used to carry out experiments for this project were funded by NSF CNS 0454333 and NSF CNS-0421109 in partnership with Rice University, AMD and Cray. LabelHash includes code related to proximity data structures and coordinate transformations from the OOPSMP. The PDB-to-EC mapping from PDBSProtEC. And Lydia E&...

ompl.kavrakilab.org

Mailing Lists

http://ompl.kavrakilab.org/mailingLists.html

Japanese Introduction to OMPL. Use OMPL within Other Systems. Ompl on Bitbucket (Mercurial). Omplapp on Bitbucket (Mercurial). Ompl on Travis CI (Linux). Omplapp on Travis CI (Linux). Ompl on AppVeyor CI (Windows). Omplapp on AppVeyor CI (Windows). Email ompl- .nosp@m. To write to the OMPL discussion mailing list. You can subscribe to the list and see an archive of previous messages here. Email ompl- .nosp@m. Physical and Biological Computing Group. Bull; Department of Computer Science.

ompl.kavrakilab.org

Demos

http://ompl.kavrakilab.org/group__demos.html

Japanese Introduction to OMPL. Use OMPL within Other Systems. Ompl on Bitbucket (Mercurial). Omplapp on Bitbucket (Mercurial). Ompl on Travis CI (Linux). Omplapp on Travis CI (Linux). Ompl on AppVeyor CI (Windows). Omplapp on AppVeyor CI (Windows). This demo is essentially the same example described in the first tutorial. It illustrates how to use the main classes. This is the demo program used in the last beginner tutorial. Analyze and visualize planner data in Python. This demo relies on the graph-tool.

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Tel: 90-216-661 55 62. Fax: 90-216-661 55 63. Avrupanın, otomat makinalarında kullanılan en kaliteli ve güvenilir ödeme sistemleri üreticisi olan İtalyan COGES. Firmasının, İtalyanın sayılı otomat makinaları üreticilerinden. Ve Avrupa ve Amerikadaki en kaliteli plastik ambalaj ve otomat bardakları üreticisi olan 5 ayrı firmayı bünyesinde bulunduran COVERIS. Ödeme Sistemleri (Bozuk paralı, kağıt paralı, kredili sistemler). Orjinal İtalyan Otomat Yedek Parçaları. Bir komut ile çalışan cihazlardır. Otomatta...

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Kavraki Lab | Home

Kavraki group in March 2017. Planning motions for the legged version of Robonaut2 inside the International Space Station. We have developed a method to explore flexibility of large macromolecules. Task and motion planning. In integrated task and motion planning, a search for a sequence of discrete actions is interleaved with finding continuous motions. Physics simulation-based motion planning. We have developed a new docking protocol for large ligands and were able to predict new binding modes.

kavrakilab.rice.edu

Welcome to the Kavraki Lab webpage | Kavraki Lab

Postdoctoral Position in Computational Bioengineering. Postdoctoral Position in Robotics. Opportunities for graduate students. Planning motions for the legged version of Robonaut2 inside the International Space Station. We have developed a method to explore flexibility of large macromolecules. We were able to automatically identify an intermediate stable state of a Maltose-Binding Protein. Physics simulation-based motion planning. Equilibrium ensembles of proteins. In bioinformatics and biomedicine.

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